Input parameters:

  Query = ENSDARP00000073422 (Len=237)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000073422, Len=237):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKVVTCEIAWHNKEPVYSLDFQQSGDGKTQRLATAGVDTTVRMWRVDKGPDGKAVVEFLSNLARHTKAVNVVRFSPTAEV 80  
WD40-rpts       (___________________WD 1___________________)           (________________WD 2___

Query       81 LASGGDDAAILLWKLNDNKEPEQTPTFQEEEDAQLNKESWSVVKTLRGHIEDVYDISWTSDGNFMASGSVDNTAIMWDVN 160 
WD40-rpts      _____________)                         (_________________WD 3________________)  

Query      161 KGQKMCIFNDHKSYVQGVAWDPLGQYISTLSCDRVMRVYSAHHNTKRTHSKTYFTDSSCFKIPCCFRPSIIHRESQT 237 
WD40-rpts       (_________________WD 4________________)                                     

4 WD40-repeats found in QUERY=ENSDARP00000073422 (Len=237):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     2-45       7.68  432.08  9.3e-05       22.5%     54.67
  WD 2:  Seg  5    57-94       9.92  524.48  5.3e-06       40.0%     47.78
  WD 3:  Seg  8   120-158      8.61  470.25  2.9e-05       37.5%     55.33
  WD 4:  Seg 12   162-200      9.23  496.02  1.3e-05       25.0%     53.26

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    2-45     KVVTCEIAWHNKEPVYSLDFQQSGDGKTQRLATAGVDTTVRMWR
   WD 2   57-94     --EFLSNLARHTKAVNVVRFSPTA----EVLASGGDDAAILLWK
   WD 3  120-158    -WSVVKTLRGHIEDVYDISWTSDG----NFMASGSVDNTAIMWD
   WD 4  162-200    -GQKMCIFNDHKSYVQGVAWDPLG----QYISTLSCDRVMRVYS

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDG----KRLVSGSEDGTIKVWD