Input parameters:

  Query = ENSDARP00000073256 (Len=554)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000073256, Len=554):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTDCGEDAKLEATKQASKEFKESENVAEKYSAMTATKHSDVNMNVGELSAAFTAVPTHKSVKKIQFANQEDKQEFSKFPT 80  
WD40-rpts                                                                                      

Query       81 KTGRRSLSRSISQSSTDSYSSAASYTDSSDDETSPREKSQVNSKGSSDFCVKNIKQAEFGRREIEIAEQDMSALISLRKR 160 
WD40-rpts                                                                                      

Query      161 AQGEKPLAGAKVAGCTHITAQTAVLIETLVALGAQCRWTACNIYSTQNEVAAALAESGVSVFAWKGESEDDFWWCIDRCV 240 
WD40-rpts                                                                                      

Query      241 NMDGWQANMILDDGGDLTHWVYKKYPSVFKKVRGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRES 320 
WD40-rpts                                                         (____________________________

Query      321 ILDGLKRTTDVMFGGKQVVVCGYGEVGKGCCSALKALGAIVCVTEIDPICALQACMDGFRVVKLNEVVRQMDMVITCTGN 400 
WD40-rpts      ______WD 1__________________________________)                                   

Query      401 KNVVTREHLDRMKNGCIVCNMGHSNTEIDVASLRTPELTWERVRSQVDHVIWPDGKRVILLAEGRLLNLSCSTVPSFVLS 480 
WD40-rpts                                                                                      

Query      481 ITATTQALALIELYNAPEGRYKQDVYLLPKKMDEYVASLHLPNFDAHLTELSDEQAKYMGLNKNGPFKPNYYRY 554 
WD40-rpts                                                                                

1 WD40-repeats found in QUERY=ENSDARP00000073256 (Len=554):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  8   292-365      2.83  231.69  0.04597       17.5%     25.65

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  292-365    AGKLCVPAMNVNDSVTKQKFDNLYCCRESILDGLKRTTDVMFGGKQVVVCGYGEVGKGCCSALKALGAIVCVTE

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGK---------------------RLVSGSEDGT-------------IKVWD