Input parameters:

  Query = ENSDARP00000072504 (Len=227)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000072504, Len=227):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MFVSLKCVCVFLQVHRHTAMQSQGSQSQQNIHTTTLARAKTEILRVIEILIEKMPSDVVDLLVEVMDIIMYCIEGSLVKK 80  
WD40-rpts                                                                               (______

Query       81 KGLSECFPAICRFYMVAYCERSYRIAVGARQGSVALYDVRTGKCQHIHGHKGPITAVSFAPDGRYLATYSNADSHISFWQ 160 
WD40-rpts      ______________WD 1___________________)(__________________WD 2__________________)

Query      161 MNTSLLGSIGMLNSAPQLRCIKTYQVPPVQPASPGSQNALKLARLIWTSNRNVILMAHDGKEHRFMV 227 
WD40-rpts      (___________________WD 3___________________)                       

3 WD40-repeats found in QUERY=ENSDARP00000072504 (Len=227):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    74-118      8.25  455.33  4.5e-05       17.5%     43.06
  WD 2:  Seg  6   119-160      8.42  462.47  3.6e-05       35.0%     54.77
  WD 3:  Seg 10   161-204      7.01  404.07  0.00022        7.5%     43.45

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   74-118    EGSLVKKK-GLSECFPAICRFYMVAYCERSYRIAVGAR-QGSVALYD
   WD 2  119-160    VR-----TGKCQHIHGHKGPITAVSFAPDGRYLATYSNADSHISFWQ
   WD 3  161-204    MN-TSLLG-SIGMLNSAPQLRCIKTYQVPPVQPASPGS-QNALKLAR

   WD40 Template    TG-----E-CLRTLSGHTSGVTSVSFSPDGKRLVSGSE-DGTIKVWD