Input parameters:

  Query = ENSDARP00000072500 (Len=1096)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000072500, Len=1096):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 SAEMSVKAISERTGKELLYKYICTTAVVRNRFSCVTVTTDTNWDCITVDHPWLLTERLVVKPDQLIKRRGKLGLVAVDLK 80  
WD40-rpts                                                                                      

Query       81 LESVQEWLKSHLMTEITVGNAKGVLKKFLIEPFVPHIQEEEFYVCIYASREGSHVLFHHEGGVEIGDVDNKAQRLTLGID 160 
WD40-rpts                                                      (_______________________________

Query      161 EKLMEEIVTQQLLVHVPDDKKEVLASFIVGLFNLYEDLYFTYLEINPLVVTKDGVYVLDMAAKIDSAAEYICKPKWGDVE 240 
WD40-rpts      _WD 1_______________________________)                                           

Query      241 FPPPFGREAYPEEAYIADLDSKSGASLKLTVLNPSGRIWTMVAGGGASVVYSDTICDLGGVDELANYGEYSGSPSEQQMY 320 
WD40-rpts                                                                                      

Query      321 DYAKTILLLMTREKHSDGKVLIIGGSIANFTNVAATFKGIVRAIKDYQEPLKEHEVTIFVRRGGPNYQEGLRVMGEVAIG 400 
WD40-rpts                                                                                      

Query      401 KTTGIPIHVFGTETHMTAIVGMALGHRPIPNQPPVAAHTASFLLNSSASAATPPITRNTSLSEHNTCSVTDAITPTTGAP 480 
WD40-rpts                                                                                      

Query      481 PAKPTTLFSRQTKVIVCGIQTQAVQGMLDFDYVCSRDEPSVVAMVYPYTGDHKQKFYWGHKEILLSVYKNMADAMKKHPD 560 
WD40-rpts                                                                                      

Query      561 VDVLINFASLRSAFDSTMETLQYPQIRTIAIIAEGIPEALTRKLIKTADEKGVTIIGPATVGGIKPGCFKIGNTGGMLDN 640 
WD40-rpts                                                                                      

Query      641 ILASKLYRPGSVAYVSSSGGMSNELNNIISHTTDGVYEGVAIGGDRFPGSTFMDHVLRYQDTPGIKMIVVLGEIGGTEEY 720 
WD40-rpts                                                                                      

Query      721 NICQGITDGLITKPIVCWCIGTCATLLSSEVQFGHAGACATQVLETAVAKNQALREAGAFVPNSFDELGDVIKFVYDDLV 800 
WD40-rpts                                                                                      

Query      801 TNGIIVPEQEVPPPTVPMDYSWARELGLIRKPASFMTSICDERGQEVIYAGMPITEVFKEEMGVGGVLGLLWFQRRLPRY 880 
WD40-rpts                                                                                      

Query      881 ACQFIEMCLMVTADHGPAVSGAHNTIVCARAGKDLVSSLTSGLLTIGDRFGGALDAAAKQFSKAFDSGLLPMEFVNKMKK 960 
WD40-rpts                                                                                      

Query      961 DGVLIMGIGHRVKSINNPDMRVQILKDFVKQHFPSTQLLDYALEVEKITTSKKPNLILNIDGFIGVAFVDLLRTCGGFTR 1040
WD40-rpts                                                                                      

Query     1041 DEADEFVDIGTLNGIFVLGRSIGFIGHYLDQKRLKQGLYRHPWDDISYVLPEHMST 1096
WD40-rpts                                                              

1 WD40-repeats found in QUERY=ENSDARP00000072500 (Len=1096):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   129-197      2.92  235.15  0.04139       25.0%      4.42

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  129-197    SREGSHVLFHHEGGVEIGDVDNKAQRLTLGIDEKLMEEIVTQQLLVHVPDDKKEVLASFIVGLFNLYED

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTI----------KVW-------------------D