Input parameters:

  Query = ENSDARP00000072241 (Len=2043)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000072241, Len=2043):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVKLANPLYTEWILEAIQKIKRQKQRPSEERICHAVSSTRGLDKGVVLHQLELAVKDGSILKVTSKGCASYKDPDNPGRI 80  
WD40-rpts                                                                                      

Query       81 TPFKLGGSGTVSVGSVIPAGDLRHVDWNKILRRAIEGLGVPSGSSLRNIERFLRSQGDLVNVVANPRFQQRLRLAAKRAV 160 
WD40-rpts                                                                                      

Query      161 NNGRLLKDGPLYRLNSGGLGGKSCFRNVGVFGVDLPPVTLLPHERDQPRADPIPICSFCLGTKESNRDKRPEELLSCADC 240 
WD40-rpts                                                                                      

Query      241 GSSGHPSCLKFSADLTANVKALRWQCIECKTCSSCQIQGKNADEMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVCRPK 320 
WD40-rpts                                                                                      

Query      321 EQEGKRLLHKTAAQIKRRYAKPGRPRKNLAHPTMSDSGGPGSVELSEKARHGRGSISTFCTPPSSSTFIPTTDGRSLTDP 400 
WD40-rpts                                                                                      

Query      401 LTSTPTLTTLPPINKKTKGLIDGLSKFFTPSPLGRRLRGEASGSSNQHRPRKRGYRKHHASMMTPGVRLNAPSSVLLTPS 480 
WD40-rpts                                                                                      

Query      481 PSQGHSPISLNPTQSSSPSSAHSPHSSSSQSSGPSLSSLPGNSQLKGLFDGLSHIFTTQGQSRQKGLPSYAPPKRVRRTQ 560 
WD40-rpts                                                                                      

Query      561 DMSTSPKMSLQLQGKKPVKGFCSKLASLASSASGWPPKRGRPFKSALHFKRTPILRKHKLLGRFRFKASPQRENITPGKG 640 
WD40-rpts                                                                                      

Query      641 RLADGRVKPDPNHAFNVERCLRREPQEGRMTLVNDHVAEEDLKLFRHVKELTAKKNGGDQGQSPPLIEFGKYEIQTWYSS 720 
WD40-rpts                                                                                      

Query      721 PYPPEYLRLPKLYLCEFCLKYMKSQDILQRHSKKCGWFHPPANEIYRKDNLSVFEVDGNISKIFCQNLCLLAKLFLDHKT 800 
WD40-rpts                                                                                      

Query      801 LYYDVEPFLFYVLTQNDEKGCHLVGYFSKEKLCQQKYNVSCIMIMPQFQRQGFGRFLIDFSYLLSRLEGQAGSPEKPLSD 880 
WD40-rpts                     (__________________________________________________________WD 1__

Query      881 LGRLSYLAYWKSVILEYLHNHPDKSVSIRGMSRATGMCPHDIATTLQQLNMIDFQDGRFVIIQRHQLIEEHMDRLRVKPR 960 
WD40-rpts      _______________________________________________________)                        

Query      961 LHEVDPDCLSWTPALVCRSPPVDLKSALALARDHRADYTASTRNLAMGMGYIGTRPPLTKCKNFRRRYSDPLFGNSTGKD 1040
WD40-rpts                                                                                      

Query     1041 FEVSEESSSDDDDDNNDDDDDDEDGEDSAVQSQSGQGLKRRRAPTMRRKRGRRRTRINSSVTTETILERTEVLDEPFENS 1120
WD40-rpts                                                                                      

Query     1121 DVESPLPEHSRRCCSEDEEEEKSQRSAVCRPGRPRTNEEDNHSNQSKEEENVEVKKDNPRPAKRKKGWPKGVKRGPPKWR 1200
WD40-rpts                                                                                      

Query     1201 LKERKMGFKLNLYTPPETPMVTVEQEQDDEQDASPASFSGPCQSFRESRPEDPELDTCVSVPPSPEPPKSHKVNEDESTD 1280
WD40-rpts                                                                                      

Query     1281 KSDTVENSPSADDTNETTPGPIDDPEQSTQNAEELEDLKPEGETEGRPVKGSGEGDEEEDEDEEPEPSHLDDHDADDEDD 1360
WD40-rpts                                                                                      

Query     1361 SHEQRMEDPVPLPERDLTEDTEPSPSNNNNKQPEEQPSPGEPPSHCSEELASESALVNLGMQDGDTVDSDHTPDSETEEE 1440
WD40-rpts                                                                                      

Query     1441 DNLEKPEEKQMGPLTPAIKEDHNICPELDMETAQAVQSLTQESEQERHFQDCAETQEACHSLQRYVHVEQSPQMTPVDDC 1520
WD40-rpts                                                                                      

Query     1521 QQSDHSSPLSSVHSHPSQSVRSVNSPAVSILESGYTQISPDQGTVSVHSLHNNMETSPIMDVPSVSDHSQQVVDSGFSDL 1600
WD40-rpts                                                                                      

Query     1601 GSIESTTENYENPSSYDSTLGNSICGTGAGAGASSQSSCSYGNLSSGGSHSQSSCAVSQQMAGPVVNNTGACSMLQQTSM 1680
WD40-rpts                                                                                      

Query     1681 SSPQGCSVKSPQGCVPERQPSHSHGHGHGHGHGHGHSHSHHHSHHQHHPHHQHHQHPQHQYQQPLSHCSMPASFPPPPMQ 1760
WD40-rpts                                                                                      

Query     1761 LPDIPESNNPSTNLGLYDRMGQGEYGTGHYGHLHKLQQLTNTIMDHSLPFSHSASHSIPSYANNNGSLSTQLGPHNPTLV 1840
WD40-rpts                                                                                      

Query     1841 SLSQPGGGPQSQSTVTPPPNMTPPPMMLQRNMATPNMNLAPSQRLQTQMPPKNHHHHPVSIRSKSAPLPPHHQQQMYGRG 1920
WD40-rpts                                                                                      

Query     1921 PQSVAMQAPGRTLAMPTRMNMGVNLMPAPAYNVNSMNVNVNMAMNTYRVTQPMMNGGYHGNPTYMNQSPQYSMQMGMMGT 2000
WD40-rpts                                                                                      

Query     2001 QPYPQQPMQAPPHGNMMYSPAGHHSYVNTGMSKQPLNGPYMRR 2043
WD40-rpts                                                 

1 WD40-repeats found in QUERY=ENSDARP00000072241 (Len=2043):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  8   816-936      3.12  243.41  0.03217       32.5%     14.52

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  816-936    NDEKGCHLVGYFSKEKLCQQKYNVSCIMIMPQFQRQGFGRFLIDFSYLLSRLEGQAGSPEKPLSDLGRLSYLAYWKSVILEYLHNHPDKSVSIRGMSRATGMCPHDIATTLQQLNMIDFQD

   WD40 Template    TGECLRTLSGHTS---------GVTSVSFSPD----G-----------------------KRLV---------------------------S--------GSE----------DGTIKVWD