Input parameters:

  Query = ENSDARP00000071640 (Len=805)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000071640, Len=805):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MASDSPRRPSRCAGGVVVRAQAATEQSYMESVVTFLQDVVPQAYTGAPPNDEKEKIVWVRFEKTDINDVARLPEFQEMHS 80  
WD40-rpts                                                                                      

Query       81 SGNDPPLCLMIGYADGMQIWSISLNGEAQELFSVRHGPVRTARILPAPHISSLNTDSFAEKRPLLGVCKSTGSSGTSPPY 160 
WD40-rpts                                                                                      

Query      161 CCVDLYSLRTGEMVKSIQFKTPIYDLHCNKRILVVSLQEKIAAFDSCTFMKKFFVTSCYPCPGPNFNPIALGSRWLAYAE 240 
WD40-rpts                                                                                      

Query      241 NKLIRCHQSRGGACGDNAQSYTATVISAAKTLKTGLTMVGKVVTQLAGTLPSGVPDEEGTAHSGTRRSPHQPGVVTIIDT 320 
WD40-rpts                                                                                      

Query      321 HTVGEGQVLVSEDSDGEGLIAHFPAHDKPISCMAFNPSGMLLVTADTLGHDFHVFQILTHPWASSQSAVHHLYTLHRGET 400 
WD40-rpts                  (___________________WD 1___________________)                        

Query      401 EAKVQDICFSHDCRWVVISTLRGTSHVFPINPYGGAPCARTHMSPRVVNRMSRFQKSAGLEEIEQELSSKQGGRCSPIPG 480 
WD40-rpts                                                                                      

Query      481 LSSSPSGSPLHAKLTSQESFNNFTNNNMGNPRLSSLPSLTVVLPLAQIKQPMTLGTITKRTGKAKPPPQISPSKSSGGEF 560 
WD40-rpts                                                                                      

Query      561 CVAAVFASSRSWFITNPNIKREKDQSRQAVVESLYILSCYGNLVEHVLEPRPISTAQKISDDTPLELNTCPRACWNLART 640 
WD40-rpts                                                                                      

Query      641 PQWNELQPPFNSNHPLVLASDFVQYYQYLLAGLVPPGSPGPITRHESYDSLASDHSGQEDEEWLSQVEIVTHTGPHRRLW 720 
WD40-rpts                                                                                      

Query      721 MGPQFQFKTIHPSGQTTVISSSSSVLQSQGPSDTQQPLLDFDTDDLDLHSLRIQPVRSEPVSMPGSSRLVADRRGQSTVI 800 
WD40-rpts                                                                                      

Query      801 DTGSG 805 
WD40-rpts           

1 WD40-repeats found in QUERY=ENSDARP00000071640 (Len=805):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 17   333-376      4.48  299.85  0.00565       20.0%     52.94

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  333-376    DSDGEGLIAHFPAHDKPISCMAFNPSGMLLVTADTLGHDFHVFQ

   WD40 Template    TGE---CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGT-IKVWD