Input parameters:

  Query = ENSDARP00000071264 (Len=515)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000071264, Len=515):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 VTTFDLCKNLNLLVTGGMDKVVRMWIPYVPRNPTGILKGHSAPVAYVCVTSENGHIYSVSTDNTAKIWHIKDQTCLFTAH 80  
WD40-rpts      (__________WD 1__________)    (_________________WD 2________________)   (_______

Query       81 PNSSQIKGELSACIYSSAAKGLYIASDSIALLSLKTKPQPKGIQIVSHKEPVLCCGYSEQFRQVVSCSEGSVIKIWDVET 160 
WD40-rpts      ____________WD 3__________________)   (_________________WD 4________________)   

Query      161 GALIFEFGCAHGDSAITCMTFDTSGRRLMTGGRDGLIKLWNFNNGQCVKILSREGKCPEICDCSYLTLHGNTFVISVGWS 240 
WD40-rpts      (__________________WD 5_________________)   (___________________WD 6____________

Query      241 RRIDIYLSVTRAFVHFRKRPTPSWQDDMRNGHKEDILCIAHCTPHLLATGSFDGEIIVWNVVSGRIQCRFQTPQSQKHTF 320 
WD40-rpts      ______)               (________________WD 7________________)                    

Query      321 LEEGLQNTSVLSLIFLKTRAFVPELASSAWLVSSGSRDAHKGYVNFWSVLNGGKFVASFQASHLQQQITKLALTQDDSML 400 
WD40-rpts            (__________________WD 8__________________)      (_________________WD 9____

Query      401 FTADHVGFIYVYNVKQYAMGPEQNPPEKINFWRAHIRSITGSSLKIVDKDQFLLTSSMDCSVRLWNIHGDYIGTFGQEED 480 
WD40-rpts      ____________)            (__________________WD10_________________)              

Query      481 WRIETPSSWKHPAVPYEILIDPLSMPSHPVLDEEI 515 
WD40-rpts                                         

10 WD40-repeats found in QUERY=ENSDARP00000071264 (Len=515):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-26       4.80  312.91  0.00377       17.5%     36.26
  WD 2:  Seg  4    31-69       8.76  476.56  2.3e-05       27.5%     54.41
  WD 3:  Seg  8    73-115      6.71  391.93  0.00032       20.0%     53.80
  WD 4:  Seg 12   119-157      9.04  487.91  1.7e-05       27.5%     55.64
  WD 5:  Seg 16   161-201      8.23  454.78  4.6e-05       32.5%     56.20
  WD 6:  Seg 20   205-247      5.81  354.63  0.00103       20.0%     55.60
  WD 7:  Seg 25   263-300      6.75  393.33  0.00031       25.0%     44.66
  WD 8:  Seg 30   327-368      5.47  340.57  0.00160       17.5%     37.95
  WD 9:  Seg 33   375-413      7.34  418.06  0.00014       17.5%     55.24
  WD10:  Seg 37   426-466      6.98  402.92  0.00023       20.0%     52.65

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-26     -----------------V----T--TFDLCK--NLNLLVTGGMD---KVVRMWI
   WD 2   31-69     RNPTGILK--GH--SAPV----A--YVCVTS--ENGHIYSVSTD---NTAKIWH
   WD 3   73-115    QTCLFTAH--PN--SSQIKGELS--ACIYSS--AAKGLYIASDS---IALLSLK
   WD 4  119-157    QPKGIQIV--SH--KEPV----L--CCGYSE--QFRQVVSCSEG---SVIKIWD
   WD 5  161-201    GALIFEFG--CAHGDSAI----T--CMTFDT--SGRRLMTGGRD---GLIKLWN
   WD 6  205-247    GQCVKILSREGK--CPEI----C--DCSYLTLHGNTFVISVGWS---RRIDIYL
   WD 7  263-300    SWQDDMRN--GH--KEDI----L--CIAHCT--PH-LLATGSFD---GEIIVWN
   WD 8  327-368    NTSVLSLI--FL--KTRA----F--VPELAS--SAWLVSSGSRDAHKGYVNFWS
   WD 9  375-413    FVASFQAS--HL--QQQI----T--KLALTQ--DDSMLFTADHV---GFIYVYN
   WD10  426-466    PEKINFWR--AH--IRSI----TGSSLKIVD--KDQFLLTSSMD---CSVRLWN

   WD40 Template    GECLRTLS--GH--TSGV----T--SVSFSP--DGKRLVSGSED---GTIKVWD