Input parameters:

  Query = ENSDARP00000070752 (Len=1227)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000070752, Len=1227):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 AQSCQSSTSCNVVLTDSQGSFTSPCYPNDYPPSQSCNWTIQAPAGFIVQITFLDFELEEAQGCIYDRVVVKTGTSDAKFC 80  
WD40-rpts                                                                             (________

Query       81 GLTANGLTLNSTGNVMEVFFNSDFSVQKKGFHISYKQVAVTLRNQKVTMPKSSKTILRVSNSISIPVLTAFTVCFEIART 160 
WD40-rpts      _________WD 1________________)                                                  

Query      161 AQKATETIFTLSDAAGTSILAFEKTSNGMELFIGASYCSVDNLLTSSDITATMKPLCLTWTKSSGLIGVYFGGHYFSSIC 240 
WD40-rpts                                                                                      

Query      241 SASQIYTLQSGGLLQIAGKGSSSVSVDDQNLDGFIYNFRLWDHAMLSSELSALTCDTVGNVVDWDHSYWTIPGSSTQTDS 320 
WD40-rpts                                                                                      

Query      321 TLSCSEYTEIESVPTVNTTSFAPVRQAVSKQEHLESHSDLSLPWAMSELAQVSERLETDSSWTLIPSSSMSPGVTGVQMI 400 
WD40-rpts                                                                                      

Query      401 QSELKSLPGQTAAPPEWSPTHLVDIKLTSTVAWGLSKETATKDTVKDVQHDQKKSTMVTHGKMESLTKEDIFYRSTLVVT 480 
WD40-rpts                                                                                      

Query      481 DEQTPDRDATAIISQWLNQTFQNWMYRVYVDGIRQIYLALLVYKNTTDVNLAEVEIESMLRSAPAIGNGLTLDSVTVNLM 560 
WD40-rpts                                                                                      

Query      561 ENAMDVAVQLADISNNGLSKEELTQVVTKVMELVNIAKINATLASTVVTIISNVMVSSEDAQKDASETALKAVDELVQKI 640 
WD40-rpts                                                                                      

Query      641 EFDGPSLTISSKNLVVGVSALDTTNFNGSTLSAFIATNTTDPQIDFDSEAHNALAVVTLPPTLLQNLSLSQIEKVSRINF 720 
WD40-rpts                                                                                      

Query      721 MFFGRTGLFQDHQNNGLTLNSYVVASSVGNFTIKNLQDPVRIEIAHLEYQKDPNPQCVFWDFNLQNYSGGWNSDGCKVGS 800 
WD40-rpts                                                                                      

Query      801 DSNSNRTVCLCNHLTHFGILMDVSRAAELIDEKNNRVLTFITYIGCGISAIFSAATLLTYIAFEKLRRDYPSKILMNLST 880 
WD40-rpts                                                                                      

Query      881 SLLFLNMVFLLDGWLASYEIKELCVTVAVFLHFFLLTSFTWMGLESIHMYIALVKVFNTYIRRYILKFCIVGWGVPATIV 960 
WD40-rpts                                                                                      

Query      961 AIVLAVSKDSYGKNYYGKGKDGQGTSEFCWILNPVVFYVTCVAYFSIIFLMNVAMFIVVMIQICGRNGKRSNRTLREDIL 1040
WD40-rpts                                                                                      

Query     1041 RNLRSVVSLTFLLGMTWGFAFFAWGPVSLAFMYLFTIFNSLQGLFIFVFHCALKENVQKQWRRYLCCGKLRLADNSDWSK 1120
WD40-rpts                                                                                      

Query     1121 TATNNTKKVSSDNLGKSLSSSSFGSTTANWTSKAKATLNPFARHSNAGKSSSNQSSPKCSPSDGEPSSSILPVHQVLDKV 1200
WD40-rpts                                                                                      

Query     1201 KGYCSVRSDNFYKNIIMSDSFSNSTKF 1227
WD40-rpts                                 

1 WD40-repeats found in QUERY=ENSDARP00000070752 (Len=1227):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5    72-110      2.95  236.32  0.03994       15.0%     14.32

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   72-110    TGTSDAKFCGLTANGLTLNSTGNVME-VFFNSDFSVQKKG

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD