Input parameters:

  Query = ENSDARP00000070559 (Len=320)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000070559, Len=320):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSVGFIGAGQLAHALVKGFTAAGVIATHRITASSPDTDLPTVIGLRKMGAFFTTSNKETVSKSDVLFLAVKPHIIPFVLD 80  
WD40-rpts                                                                                      

Query       81 EIGPDIEDRHLIVSCAAGVTISSIEKKLLQYRSAPKVIRCMTNTPVVVREGATVYATGTHAEVEDGKLLEQLMASVGYCT 160 
WD40-rpts                                                       (______________________________

Query      161 EVEEDLIDAVTGLSGSGPAYAFTAVDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLESEQHPGQLKDNVASPGGATIH 240 
WD40-rpts      _________________________________________________WD 1___________________________

Query      241 ALHVMESGGFRSLLINAVEASCIRTRELQYLADQEKISPAAIKKTTLDKVLQQPGVTAAGVGVRTGINLFNSTNPKHKKS 320 
WD40-rpts      ___________________________________________________)                            

1 WD40-repeats found in QUERY=ENSDARP00000070559 (Len=320):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   130-292      3.33  252.22  0.02457       25.0%     -0.23

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  130-292    EGATVYATGTHAEVEDGKLLEQLMASVGYCTEVEEDLIDAVTGLSGSGPAYAFTAVDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLESEQHPGQLKDNVASPGGATIHALHVMESGGFRSLLINAVEASCIRTRELQYLADQEKISPAAIKKTTLDKVLQ

   WD40 Template    TGECLRTLSGHTS--------------------------GVTSVSFS---------------------P---------------------DGKR-------LVSGSE-----------DGT------------------------IKVW-------------D