Input parameters:

  Query = ENSDARP00000070488 (Len=763)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000070488, Len=763):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAGVRALGSLSRLTTSRYTLFPGVTRRTFKFAACMMARTHVSYEVKGDVAVVRMNDPTAKVNTLSVQMQKDMTEVMDEVW 80  
WD40-rpts                                                    (__________________________WD 1___

Query       81 GNSAVQSVVLISSKPGCFIAGADISMIKACKTAEEVTGLSQEGQRMFEKIEKSPKPIVAAINGSCLGGGLEFVIACQYRI 160 
WD40-rpts      ______________________)                                                         

Query      161 ATKSKKTVLGCPEVMLGLLPGAGGTQRLPKMLGLPSAFDVMLTGRSIRADKAKKMGLVHQLVDTLGPGLKSPEERTIEYL 240 
WD40-rpts                                                                                      

Query      241 EEVAVEAARGLAQKKITLTKEKGWMQKIQDYVMSYPFVRQQIYNTVEKKVMKQTKGLYPAPLKIIESVKAGVEQGPTTGY 320 
WD40-rpts                                                                                      

Query      321 LVESQQFGKLAMTNESKALIGLYHGQVACKKNRFGTPEKEVKTLAILGAGLMGAGIAQVTVDKGIHTILKDTTVDGLSRG 400 
WD40-rpts                                                                                      

Query      401 EQQVFKGLNDKTKKKSLTSFERDTFLSNLTGQLDYNGFNKADMIIEAVFEDLSIKHKVLKEVEAVIPPHCIFATNTSALP 480 
WD40-rpts                                                                                      

Query      481 IKDIAAVSKRPDKVVGMHYFSPVDKMQLLEIITTDKTSKDTTASAVAVGLKQGKVIIVVGDGPGFYTTRCLAPMLAEAVR 560 
WD40-rpts                                                                                      

Query      561 ILQEGTDPKKLDSLTTGFGFPVGAATLADEVGIDVAAHVAEDLGKAFGSRFGGGNVEFLKSMVEKGFKGRKSGKGCYVYQ 640 
WD40-rpts                                                                                      

Query      641 PGLKRRDVNTEALEILEAYKLTPNAAISSDSDIQYRLVSRFVNEAVLCLQEGILANPVEGDIGAVFGLGFPPCLGGPFRF 720 
WD40-rpts                                                                                      

Query      721 VDSFGADKLVEKMRRFEEVFGNQFTPCQLLLDHARDPSKKFHK 763 
WD40-rpts                                                 

1 WD40-repeats found in QUERY=ENSDARP00000070488 (Len=763):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    47-103      3.32  251.98  0.02475       17.5%     12.85

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   47-103    GDVAVVRMNDPTAKVNTLSVQMQKDMTEVMDEVWGNSAVQSVVLISSKPGCFIAGAD

   WD40 Template    TGECLRTLSGHTSGVTSVS-----------------FSPDGKRLVSGSEDGTIKVWD