Input parameters:

  Query = ENSDARP00000070393 (Len=607)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000070393, Len=607):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSDTGGKSSIPNGGSDDPEPGEGRGEAETSDASAVAEAQASPESANLNSAAEGSAVGQDKLMADSEQKQGPAEEEDTDSM 80  
WD40-rpts                                                                                      

Query       81 DGSGLYSLTEEGERESEGGGRGKDEGKRSARKRNRPSGGAAHHSSSSDDDDENEEDDDVEEEDEQAMEAWLGADLCDLSR 160 
WD40-rpts                                                                              (_______

Query      161 PSWRAIPSLRAREIGRDSQQFVRKVCGARGLVQRLELQGRLERHTGCVNTLHFNPSGTRLASGSDDLRVVIWDWARRKAE 240 
WD40-rpts      ____________WD 1___________________)________________WD 2________________)(______

Query      241 LEFDSGHKSNVFQAKFLPHSGDSTLAMCARDGQIRVAELSATQRCKNTKRVAQHKGAAHKLALEPDSPCSFLSAGEDAVV 320 
WD40-rpts      ______________WD 3___________________)      (_________________WD 4______________

Query      321 FGIDLRLDRPANKLVVVKEGEKKVGLYTIYVNPANTHHFAVGGRDQYVRIYDQRKINEHDNNGVLKKFCPSHLVSSESKT 400 
WD40-rpts      ___)              (______________WD 5______________)                (___________

Query      401 NITCLVYSHDGTELLASYNDEDIYLFDSSHSDGADYHRKYKGHRNNATVKGVNFYGPCSEFVVSGSDCGHIYLWDKNSAR 480 
WD40-rpts      ______WD 6________________)      (__________________WD 7__________________)   (_

Query      481 VVQFMEGDRGGVVNCLEPHPHLPGLATSGLDHDVKLWAPTAENPTTLKGLKEVMKKNKRERDEDNVRHGDQYDTQLLWFL 560 
WD40-rpts      ________________WD 8_________________)  (_________________WD 9________________) 

Query      561 MRHMRNRRPQRTRRGEGGEGDTDESWSSPESSDEEDGGPDHVQCMSS 607 
WD40-rpts              (_________________WD10________________)

10 WD40-repeats found in QUERY=ENSDARP00000070393 (Len=607):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   153-196      3.77  270.37  0.01406       10.0%     27.15
  WD 2:  Seg  2   195-233      9.40  503.02  1.0e-05       40.0%     52.03
  WD 3:  Seg  6   234-278      7.23  413.32  0.00017       32.5%     54.57
  WD 4:  Seg 10   285-324      6.75  393.60  0.00031       17.5%     53.69
  WD 5:  Seg 15   339-372      5.23  330.67  0.00217       17.5%     44.38
  WD 6:  Seg 19   389-427      7.94  442.51  6.8e-05       25.0%     47.28
  WD 7:  Seg 22   434-475      6.78  394.66  0.00030       37.5%     51.70
  WD 8:  Seg 26   479-518      7.29  415.78  0.00015       20.0%     53.59
  WD 9:  Seg 30   521-559      7.93  442.30  6.8e-05       20.0%     46.85
  WD10:  Seg 34   569-607      7.02  404.56  0.00022       15.0%     38.90

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  153-196    --------ADLCDLSRP--SWRAIP-SL-RA--R-EIGRDSQQFVRKVCGARGLVQRLE
   WD 2  195-233    -LE---LQGRLERHTGC--VNTLHF-NP-SG--T-RLASGS---------DDLRVVIWD
   WD 3  234-278    WARRKAELEFDSGHKSN--VFQAKF-LP-HSGDS-TLAMCA---------RDGQIRVAE
   WD 4  285-324    -CK---NTKRVAQHKGA--AHKLAL-EP-DS--PCSFLSAG---------EDAVVFGID
   WD 5  339-372    EGE----------KKVG--LYTIYV-NPANT--H-HFAVGG---------RDQYVRIYD
   WD 6  389-427    CPS---HL-VSSESKTN--ITCLVY-SH-DG--T-ELLASY---------NDEDIYLFD
   WD 7  434-475    -AD---YHRKYKGHRNNATVKGVNFYGP-CS--E-FVVSGS---------DCGHIYLWD
   WD 8  479-518    -AR---VVQFMEGDRGG-VVNCLEP-HP-HL--P-GLATSG---------LDHDVKLWA
   WD 9  521-559    -AE---NPTTLKGLKEV--MKKNKR-ER-DE--D-NVRHGD---------QYDTQLLWF
   WD10  569-607    -PQ---RTRRGEGGEGD--TDESWS-SP-ES--S-DEEDGG---------PDHVQCMSS

   WD40 Template    TGE---CLRTLSGHTSG--VTSVSF-SP-DG--K-RLVSGS---------EDGTIKVWD