Input parameters:

  Query = ENSDARP00000069232 (Len=853)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000069232, Len=853):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MIGSPDVVAFTKEDDFGDSFSDPLSLPDEFSVPLFTHAANANPWTKTSYAKFSKDFILISEFSEQVGPQPLLTIPSDPKV 80  
WD40-rpts                                                                                      

Query       81 CGTFDLNYFSLRIMSVDYQASFVGHPPGSNYPKLNFVEDSKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISAD 160 
WD40-rpts                                                                                      

Query      161 ERKIMQQFQELSSEFSKASECLKSGNRKAFANELEKKLKDLEYTRSVLHKETELQKMNNGCYSTQAIEKANELANVEKSI 240 
WD40-rpts                                                                                      

Query      241 YEHKDLLRQITSYPSRRKRDVDFVQCEAEKPPVMDETLKDTNPSDSAENTVETESRKSSYTPQLIKAKSAKCFDKRLKTL 320 
WD40-rpts                                                                                      

Query      321 EELCDTSFFLQTLEQLNAVEKSFRGDLCFIYTSQIDRALVSKQRVTSFLFEAEHDWEDGGASKNFSIPSNNPTIPILNFS 400 
WD40-rpts                                                                                      

Query      401 GEPLSLDSYTTCIDVDHLKPGVESGEGPPESSTSDITQETSEAADTETKGSFSSDKSIEALGSVSPSSLQTNFFDGLERR 480 
WD40-rpts                                                                                      

Query      481 SKISIPSYSDNASSSIAVPHRRSDGNLVQMDAACCIGQDGFIFEDPLPELAQECCGDTVVNQEPLSLLHGDPALQMDYIL 560 
WD40-rpts                                                                                      

Query      561 EESPNMGLTFSELNTSVLSEEVAKINIEDVFDRTSFMSISTSSDRAVSPFTYGSALTVKQKKKAGHSALRFIRQYPFAQQ 640 
WD40-rpts                                                                                      

Query      641 AISCLLSGRTLVILGVDEGTVRKLVNALFIFVPNLGKYGETVQPWLSTPFQLTDLQRWKLIGLQRAVSPAGSSILHSLNR 720 
WD40-rpts            (_______________________________________WD 1______________________________

Query      721 YSRYISILDCDNKTLRCPPYKGTLISHLADHRTQIKRGSTYFLHIQGMLTQLTAKAFLYTFCHHIHLPMDINDQGSVTSR 800 
WD40-rpts      ________)                                                                       

Query      801 RTNFLLQLGYTVEESKIIQYLSELIKQHYIHGSAKVGNPSFSFNYTTSYLYKI 853 
WD40-rpts                                                           

1 WD40-repeats found in QUERY=ENSDARP00000069232 (Len=853):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  9   647-729      3.33  252.37  0.02446       25.0%     18.59

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  647-729    SGRTLVILGVDEGTVRKLVNALFIFVPNLGKYGETVQPWLSTPFQLTDLQRWKLIGLQRAVSPAGSSILHSLNRYSRYISILD

   WD40 Template    TGECLRTLSGH---------------------TSGVTSVSFSP------------DGKRLVSGSEDGT----------IKVWD