Input parameters:

  Query = ENSDARP00000068663 (Len=898)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000068663, Len=898):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAGKTLLFKSNYAVSSRIEPFYKGGKVQVSGDEQHIFCTYGPKINILQISTGKIIHSIEQEDQEDITAFALSPDDEMLVS 80  
WD40-rpts       (_________________WD 1_________________)          (_________________WD 2_______

Query       81 ASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDI 160 
WD40-rpts      __________)   (_________________WD 3_________________)   (__________________WD 4

Query      161 SRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVEGVV 240 
WD40-rpts      _________________)   (_________________WD 5________________)           (________

Query      241 LLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDSSSSRCVFTQTLPDASSHTEDEDAEDEERLGLLQLLLLPRTGRLITV 320 
WD40-rpts      __________WD 6__________________)                  (_________________WD 7_______

Query      321 TAEHNILLYQTPTLAVQQQFVGYNDDVLDVKFVGKDDTHIAVATNSSQLKVFELSTNSCQILHGHTDTILSIDVFRKGSM 400 
WD40-rpts      _________)   (_________________WD 8_________________)  (_________________WD 9___

Query      401 FATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTE 480 
WD40-rpts      _____________)       (_________________WD10_________________)            (______

Query      481 RAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSC 560 
WD40-rpts      ___________WD11________________)   (_________________WD12________________)   (__

Query      561 LKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVWTDK 640 
WD40-rpts      _______________WD13________________)   (_________________WD14________________)  

Query      641 LRKTVIIKSTKKVDQSLFKFTHFRNLIYXYYYILXLNLLIXNXXTPVAPPLILLLVQCGCAVTEWCRIVYTFVSNCSESV 720 
WD40-rpts       (_________________WD15________________)                                        

Query      721 LRYCTVWNTNSRSCLDAQAVLKVLLTHLSPEEMLQFQSAHTHLQALVPYTERHMQRINRLLQASMFLDYMWQKMRITGAM 800 
WD40-rpts                                                                                      

Query      801 DSVNMQEDEDDDGVQSVFITDKQPMQTTEEEEENEEMQCSGDSEQRLHEDEAVCTSKTAAGKLPNTVDQLLDSDEDKEEE 880 
WD40-rpts                                                                                      

Query      881 EFSCKPAASVLQEIVSVS 898 
WD40-rpts                        

15 WD40-repeats found in QUERY=ENSDARP00000068663 (Len=898):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     2-41       4.07  282.60  0.00964       25.0%     29.70
  WD 2:  Seg  6    52-91       6.16  369.18  0.00066       27.5%     58.80
  WD 3:  Seg 10    95-134      7.72  433.67  8.9e-05       40.0%     58.70
  WD 4:  Seg 14   138-178      7.60  428.64  0.00010       40.0%     56.09
  WD 5:  Seg 18   182-220      9.67  514.01  7.3e-06       45.0%     58.69
  WD 6:  Seg 23   232-273      6.69  390.83  0.00034       22.5%     56.10
  WD 7:  Seg 28   292-330      5.38  336.78  0.00180       15.0%     46.79
  WD 8:  Seg 31   334-373      5.91  358.80  0.00091       17.5%     57.14
  WD 9:  Seg 35   376-414      8.19  452.82  4.9e-05       22.5%     53.97
  WD10:  Seg 39   422-461      7.76  435.28  8.5e-05       40.0%     54.72
  WD11:  Seg 43   474-512      8.35  459.71  4.0e-05       40.0%     53.97
  WD12:  Seg 47   516-554      9.48  506.07  9.4e-06       40.0%     55.60
  WD13:  Seg 51   558-596      9.48  506.35  9.3e-06       37.5%     54.90
  WD14:  Seg 55   600-638      8.88  481.67  2.0e-05       37.5%     58.49
  WD15:  Seg 59   642-680      3.80  271.77  0.01347        5.0%     31.76

Multiple sequence alignment of 15 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    2-41     AGKTLL--FKSN-YAV-SSRIEPF-YK-GGKV--QVSGDEQHIFCTYG
   WD 2   52-91     -GKIIH--SIEQ-EDQEDITAFAL-SP-DDEM--LVSASRALLLRQWD
   WD 3   95-134    -QQCRR--SWRAVHSV-PVASMSF-DC-TSTL--LATGGCDGTIKLWD
   WD 4  138-178    -QYCTH--NLKG-SSG-VVHLVEF-HP-DISRLQLFSSSSDCAIRIWD
   WD 5  182-220    -SRCVC--VLES-HYS-PVTALAF-SP-DGHT--LVSSGRDKICSVWD
   WD 6  232-273    VYEAVEGVVLLS-GSA-DYSEMGV-KS-DALH--LVTAGSKGVLRVWD
   WD 7  292-330    -TEDED--AEDE-ERL-GLLQLLL-LP-RTGR--LITVTAEHNILLYQ
   WD 8  334-373    -LAVQQ--QFVG-YND-DVLDVKFVGK-DDTH--IAVATNSSQLKVFE
   WD 9  376-414    -TNSCQ--ILHG-HTD-TILSIDV-FR-KGSM--FATCAKDKSVRVWR
   WD10  422-461    -VHCVA--QGTG-HSN-AVGSIAC-SRMKQQF--VVSGSQDCTVKVWD
   WD11  474-512    -MKARS--TERA-HEK-DVNSVCV-SP-NDKL--LASGSQDRTAKLWA
   WD12  516-554    -LRLLG--VCRG-HRR-GVWSVQF-SP-VDQI--LGSASADGSVRIWS
   WD13  558-596    -FSCLK--TFEG-HDA-SVLKIIF-VS-RGTQ--LVSSGSDGLVKLWT
   WD14  600-638    -NECVR--TLDA-HQD-KVWALHG-GC-RDEL--MVTGSADSTITVWT
   WD15  642-680    -RKTVI--IKST-KKV-DQSLFKF-TH-FRNL--IYXYYYILXLNLLI

   WD40 Template    TGECLR--TLSG-HTS-GVTSVSF-SP-DGKR--LVSGSEDGTIKVWD