Input parameters:

  Query = ENSDARP00000068070 (Len=516)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000068070, Len=516):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRKVYSLVSLTKNREPKDAVLSLNIKQIEYPEQTREFDNRLTKTGRRSLSHSLSHSSTDSNSSGGSDAEDPENEVSPRDK 80  
WD40-rpts                                                                                      

Query       81 QRMNSKGNKDFCIKNIKLADFGRRQIELAEDEMTALMALRKAAQGEKPLAGAKIVGCTHVTAQTAVLFETLSGLGAQCRW 160 
WD40-rpts                                                                                      

Query      161 AACNIYSTQNEVAAALAERDFPVFAWKGESEDDFWWCIDRCVNVEGWEPNMILDDGGDMTHWIYKKYPHIFKKVKGIVEE 240 
WD40-rpts                                                                                      

Query      241 SITGIHRLHHLSKAGKLCVPAINVNDSVTKQKFDNLYCCRESILDSLKKTADIMFGGKQVVVCGYGEVGKGCSAALKAMG 320 
WD40-rpts                   (__________________________________WD 1____________________________

Query      321 SIVYVTEIDPICALQACMDGFRLTKLSDVVRQVDMVITCTGNKNVVVREHMDVMKNGCVVCNMGRSNTEINVSALKTPDL 400 
WD40-rpts      ______)                                                                         

Query      401 TWQHVRAQVDHIIWPDGKRMILLAEGRVLNLSSSTVPIYVLSITATTQALALIELFNAPEGRYKQDVYLLPKKLDEYVAS 480 
WD40-rpts                                                                                      

Query      481 LHLQTFDAHLTELTDDQAKYMGLSKNGPFKPNYYRY 516 
WD40-rpts                                          

1 WD40-repeats found in QUERY=ENSDARP00000068070 (Len=516):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   254-327      3.19  246.48  0.02929       17.5%     21.10

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  254-327    AGKLCVPAINVNDSVTKQKFDNLYCCRESILDSLKKTADIMFGGKQVVVCGYGEVGKGCSAALKAMGSIVYVTE

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGK---------------------RLVSGSEDGT-------------IKVWD