Input parameters:

  Query = ENSDARP00000067485 (Len=1595)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000067485, Len=1595):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MFAAVEHGPVLCSDSNILCLSWKGRVPRSQKEKPVCRRRYCEEGWLATGNGRGVVGVTFTSSHCRRDRNTPQRINFNLRG 80  
WD40-rpts                                                                  (___________________

Query       81 HNSEVVLVRWNEPFQKLATCDTDGGIFVWIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHW 160 
WD40-rpts      ___WD 1______________________)  (__________________WD 2_________________)(______

Query      161 SSEINLESQITCGIWTPDDQQVTLRTADGQVIVMDCHGRMLAHILLHEAEGIASMAWNYPSFLVEDSSESDSDSDDSTPP 240 
WD40-rpts      ____________WD 3__________________)                                             

Query      241 QGANTCVVVAVHTLKPLLTVCFTSGDISLMSNYDDLSPLLIRTGLKDVVVQWSSQGDLLAVAGMERLVTSDPTQATRNAI 320 
WD40-rpts                                                                                      

Query      321 VKFYNVRGEHIYSHCACVSACVQRPISTLCWGHRDSRVFLACGPALYVLRVEHRVSSLQLLCQQAIASAVHEEKDLAKLS 400 
WD40-rpts                                                                                      

Query      401 MPSRLSTYVSSAFAPTIKPPIPDPNNMRDFVSYPTSGNERLHCTMKRTEDNPEVGGPCYTLYLEYLGGLVPILKGRRISK 480 
WD40-rpts                                                                                      

Query      481 LRPEFVIMDPKTDGKTADEVYGNSFIPSMIDSCNCSDSSDIELNDDWVGKKSPKISRGSKSPKLPRINIDPRKSPKLSRT 560 
WD40-rpts                                                                                      

Query      561 TQEISRSPRLPIRKPSIGSPSLTRREFPLDDITQHNYLAQVTSNIWGTKFKIVGLAAFLPTNLGAVIYKTSLLHLQPRQM 640 
WD40-rpts                                                                                      

Query      641 TIYLPEVRKISVEYINLPMFSPNVFSEDEDDLPVTGASGITDDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQN 720 
WD40-rpts                                                                                      

Query      721 VQLDVLSNPTSTVAPPGVSDQGQHDTVLTAQYTVPARYSSPGQVIFGGMDVGRLLVAQMQIPVPTLPSGQPSCPVIQLPQ 800 
WD40-rpts                                                                                      

Query      801 KHSTERGEHELLLKIKTTRSAPQLAEGDAVVFTAPLEISKMNPPPPYPGTVAAAVSTSGAVGSSSSTSSSGEVCLKKGDL 880 
WD40-rpts                                                                                      

Query      881 TLYPPSAQGAQYPTPLGYERITTFDSSGNVEEVCRPRTRLVCNQNVYTLQGPGSSATLRVSSSSSAVEGKKVQLPYASAT 960 
WD40-rpts                                                                                      

Query      961 LNRLTVPRYSIPSGDPPPYPDTANQGGAGRNPGQRLDSSLIHATLRRNSREAALKVSQMLDHQRTLPPKAKASTLSASYQ 1040
WD40-rpts                                                                                      

Query     1041 PRGPTALYTCSQCSSNSSGTTSSGIIVHSNSASPLPSQSSYSLLSLDGTGGVATGAGNRERADYINSAFTEDEALNQSLR 1120
WD40-rpts                                                                                      

Query     1121 QMALNTEVVGLTVKRPPPYQWDPSVTEEIWVPQERTATLPPSGPPAPHKPPPLILGPAQHLDVSRLPFVLSPKSPTSPNN 1200
WD40-rpts                                                                                      

Query     1201 TTFPLAGAYQIALPYPSSAAYSSPPLQAVQASPRPPSPKEAVAPLSFPQQDQSVVLPPGYPPNLPNLACCPLPPMYPGTA 1280
WD40-rpts                                                                                      

Query     1281 SCSSLPVTAIPLHPWGSYNPCPPMPSPPGPAPSLPPKASHMLDKPVRSPPPQPPPLPSPPPDLQTAVSPPEAIAEAGEGF 1360
WD40-rpts                                                                                      

Query     1361 QEVLSLNESPVPQRADRFGKKNRKRLDNTRADEANVPAITEGGNKSKKEGRALGDFNSLISSPRLGGRDKKKPKGQKEQL 1440
WD40-rpts                                                                                      

Query     1441 KAKKLSKATTNEFQDSSESEPELFISGDELMNQSQSGKKSWKAKRNLRAGGCELDEIKCRKANEKEDRGLGSQGFVYIMA 1520
WD40-rpts                                                                                      

Query     1521 NKQPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK 1595
WD40-rpts                                                                                 

3 WD40-repeats found in QUERY=ENSDARP00000067485 (Len=1595):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5    61-110      5.56  344.23  0.00143       35.0%     29.71
  WD 2:  Seg  7   113-153      3.81  272.03  0.01336       22.5%     52.57
  WD 3:  Seg 11   154-195      2.98  237.65  0.03835       22.5%     39.99

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   61-110    SSHCRRDRNTPQRINFNL-RGHN--SEVVLVRWNEPFQKLATCDTDGGIFVWI
   WD 2  113-153    EGRWSV----------ELVNDRG--AQVSDFTWSHDGTQALISYRDGFVLVGS
   WD 3  154-195    VSGQRH----------WS-SEINLESQITCGIWTPDDQQVTLRTADGQVIVMD

   WD40 Template    TGECLR----------TL-SGHT--SGVTSVSFSPDGKRLVSGSEDGTIKVWD