Input parameters:

  Query = ENSDARP00000067454 (Len=568)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000067454, Len=568):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MMSGGGSSMRILIKGGRVVNDDVTEEADVYLENGRIQQVGRDLMIPGGAKVIDATGKLVIPGGIDSSVHLHQTFMNAHTQ 80  
WD40-rpts                                      (_________________WD 1_________________)        

Query       81 DDFYSGTKAALLGGSTMLISHVLPDRGASLLDAFEQMRAHADAKACCDYALHVGVTWWGPKVEREMEVLVGERGVNSFQM 160 
WD40-rpts                                                                                      

Query      161 FMAYKDTMMLKDSELYQALNTCKNIGAIARIHAENGELVLEGAKEALDLGISGPEGMEISRPEELEAEATHRAITIGNRA 240 
WD40-rpts                                                                                      

Query      241 HCPVYLVNVSSMSAADVIGAARMQGRVVQAETTVAHAVLSGMHYYHQDWAHAAAHVIAPPLRLDPNTPDNLIGLLGNDII 320 
WD40-rpts                                                                                  (___

Query      321 NVVASDHRAFSTKQKAMGKEDFTKIPHGAPGVEDRMSVIWERGVVSGKMDENRFVAVTSSNAAKIYNLYPRKGRIMPGAD 400 
WD40-rpts      ________________________________________WD 2____________________________________

Query      401 ADVVVWDPDATRTISASTQAQGGDFNLFEGQRCHGVPLVTISRGRLVCENGVFMCAQGSGKFYPMRAFPDFLYKKLIQRE 480 
WD40-rpts      ______)                                                                         

Query      481 KTLAVRGVDRAPYSGDVASVMSSIRKESGSPEGDVPMRTAATAARHTGIRDLHESSFSLSGAQVDDHIPKRSSARILAPP 560 
WD40-rpts                                                                                      

Query      561 GGRSSGIW 568 
WD40-rpts              

2 WD40-repeats found in QUERY=ENSDARP00000067454 (Len=568):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    33-72       2.77  229.08  0.04975       12.5%     21.03
  WD 2:  Seg 13   317-407      3.94  277.61  0.01125       20.0%      9.21

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   33-72     NGRIQQVGRDLMIPG--------GAKVIDATGKL------------------VI-------------------------PGGIDSSVHLHQ
   WD 2  317-407    NDIINVVASDHRAFSTKQKAMGKEDFTKIPHGAPGVEDRMSVIWERGVVSGKMDENRFVAVTSSNAAKIYNLYPRKGRIMPGADADVVVWD

   WD40 Template    TGECLRTLSGHTSGV--------TSVSFSPDGKR------------------LV-------------------------SGSEDGTIKVWD