Input parameters:

  Query = ENSDARP00000067320 (Len=2253)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000067320, Len=2253):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 GQRTLQHKSDVLETVVLVNPSEDTVISEIHCLVSDPAVHKLLVLSGQSSDQGDLVLQTGVFSHQTFLRVFAEPGVSHLLG 80  
WD40-rpts                                                                                      

Query       81 KASSGQRASLTVSCRSDAGWSSLGQQQRIRELLNYTLNPEPILPKMEGVTEFTEYISETVDVPSPFDLLEPPTSGGFLKL 160 
WD40-rpts                                                                                      

Query      161 SKPCCYIFPGGRGDSALFAVNGFNILIDGGSDRRSCFWKLVRHLDRIDSVLLTHIGADNLPGINGLLQRKVAEQEEEQSQ 240 
WD40-rpts                          (___________________________________WD 1____________________

Query      241 GSTTYSDWMKNLISPELGVVFFNVPEKLRTSESNLKVKRSIEEASLTLQYLNKLGIKPEPLFRVVSNTIEPITLFHKMGV 320 
WD40-rpts      ______________)                                                                 

Query      321 GRLDMFVLNPVKDSKEMQFLMQKWAGNSKAKTGIILPNGKEGEISVPYLTSITALVVWLPASPTEKIVRVLFPGNAPQNK 400 
WD40-rpts                                                                                      

Query      401 ILEGLEKLKHLDFLRYPVATQKDINSGVSPSAVKQTKLKQRTDSKESLKSSPKTHTPAKPSKKETDEHEDVSVVETKSDS 480 
WD40-rpts                                                                                      

Query      481 VKENKVEKKEEKKHTKSLKPKAEVIIKQDDSAKDSSKPELRKITKPELKPFTPEVRKTLHKAKTQGKPKSIKKKPTTAKA 560 
WD40-rpts                                                                                      

Query      561 EIAEITAEPVAEKTEPEKQENGTVEDISAPEDLTKDLNKIKPTEVTYQSESPKSDLTVSELPAEKDIEPSKSAEDKVGET 640 
WD40-rpts                                                                                      

Query      641 DMVEQKTKVEEVSASAGIKEVSSAAVKEKDESQTSEIEKFEDEGAAIEDEDEEEIDIQPVKKKTDDEEEEDMGIGDEEDE 720 
WD40-rpts                                                                                      

Query      721 GPAKETKDLEGVDRKHEVEEMEKQKQVEERRIEAEDEQFEEEDVIEKAELEEAEDLDAIADEEIKELSPEKVKDEEDAYM 800 
WD40-rpts                                                                                      

Query      801 SNVGGVTAGITSTAQGAAAAENLSYIQDETIPGYSETEQTISDEEIHEEAEDRIPHLQYEVGSYDVSVPDQPGSFDAMHG 880 
WD40-rpts                                                                                      

Query      881 MREMQAAAMGNGTSKVFMGAQEPAISIYTSILAAPLAEEEHVSSATSITEYDKLSSLPTSIAEDQSVASVTAPQTEDTGK 960 
WD40-rpts                                                                                      

Query      961 SSLVLDTVQPITQTEATQGKDYLHSAGTISPTSSLEEDKCFKSSPSDESPPLPLEGKNKLEHKDKEMDKPKSPVPLAPDM 1040
WD40-rpts                                                                                      

Query     1041 SKSSIPESEKASVASPKEDMSFKEQAILSSSSHSVSKLPVSEASVYPEVEDRCVSPDDSTVKMASPTHSGPPSASHSPLR 1120
WD40-rpts                                                                                      

Query     1121 MSPVEGKDKVLLKDTHQEQGVPISPTEFKFEKKNEKQESDILDEKEKPQAEKEEKIIIQKAVTAPSPLVDDFLAKKEKKE 1200
WD40-rpts                                                                                      

Query     1201 KKEQEKQKEGEGDAEEKYNDKDEFLKYAEVTDKGAGKSELEKATQPSKEDFDKDAKEKDVTGASCQFLESPDIKAETSTS 1280
WD40-rpts                                                                                      

Query     1281 PESTKIDTETHGTKETDIKNMSIMEKDISSKDDEEFKLKTTQEMEEHISGEISPETKMTKNLDFPPTVDQESKAKKADLS 1360
WD40-rpts                                                                                      

Query     1361 QDQVSLVEYYKEKFIEETPSTVEKTKDGKSAFETTFPTKFSDEDASKYEPYEKPISKDSDKEREEEDQYPGMDRDLDYIR 1440
WD40-rpts                                                                                      

Query     1441 KTSQAMELGATCSVEEHSDDEPVSFSKVDYQTSPNSSLLSKLDGSHVQLSDIEPCTSASSFSKPDVQDRDHRRDQVEETM 1520
WD40-rpts                                                                                      

Query     1521 ATPHLEDLDKTKPPLTQDFTPQGLLTSSQDQSVQGLTTSSASAYDPCTATPGSSGQSVNVDDNVLAFECTAKTDLVSSKP 1600
WD40-rpts                                                                                      

Query     1601 LVVSTEEEECMVRSQKIFAEEEDDFEDEEEEDASDLDIEKGARELSEKESKAVFDTTSASKSPEGKEKDSVSSLVYGGTA 1680
WD40-rpts                                                                                      

Query     1681 EVPQTGKIVDSSTDKTESLSTKLSSVQGEQYEVIDKQFEKSKKEDTSSVQSETSKPSDDKHEPQRTDKKPEVSESLTATQ 1760
WD40-rpts                                                                                      

Query     1761 APMSDDQISSAEEKSEEDMSSIKSDKDHVSDPKHVEPPFSKMPESETSKHAAQTTEMEKYSKNVPESSQHTAISSTMEHE 1840
WD40-rpts                                                                                      

Query     1841 DIVCLKAPPGYGEDVYEDIDSMEATSSHSPSLFKHRKGDISPSFINPSPHDLSSEEGDDDKEIPQATTSSSAKSSGGRQR 1920
WD40-rpts                                                                                      

Query     1921 GITREETPPTSLSESLPSQSDSDVPPETEECPSITAEGNLDSDEDAEHLPVDKMSAAGGSGGSHHSSSPRSHDPPPIPMK 2000
WD40-rpts                                                                                      

Query     2001 DPLPHPPHPDVCMIDPEALLNGQIQTERPVKKDHKTNRGLRKTLGKSASPARKGDAKTRRSTTPVKQTSKDSSPHTLKRK 2080
WD40-rpts                                                                                      

Query     2081 DSEKTFRLTKMSETEGSRGDSGRGLVNGVKSNAGTKDDRALSLLTTSNLKSNAGTPPGPPIYVDLAYIPNHCSAKNVDQE 2160
WD40-rpts                                                                                      

Query     2161 FFKRVRAAYYVVSGNDPGSGEPSRAVLDALLEGKAQWGTNLQVTLIPTHDTEVTRDWYQQTHEKQQDLNIMVLASSSTVV 2240
WD40-rpts                                                                                      

Query     2241 MQDESFPACKIEF 2253
WD40-rpts                   

1 WD40-repeats found in QUERY=ENSDARP00000067320 (Len=2253):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   181-255      2.96  237.00  0.03911       20.0%     15.64

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  181-255    NGFNILIDGGSDRRSCFWKLVRHLDRIDSVLLTHIGADNLPGINGLLQRKVAEQEEEQSQGSTTYSDWMKNLISP

   WD40 Template    TGECLRTLSGHTSG------------VTSVSFSPDGKRLVSG----------------SEDGTIK-------VWD