Input parameters:

  Query = ENSDARP00000066972 (Len=539)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000066972, Len=539):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MADYLISGGTGYIPDDGLSAQQLFAVGDGLTYKSDQQSVRDGHTAEELFSKGDGMTYNDFLILPGFIDFTSDEVDLTSAL 80  
WD40-rpts                                                                                      

Query       81 TKKITLKTPLISSPMDTVTESSMAIAMALMGGIGIIHHNCTPEFQANEVRKVKRFEQGFITDPVVLSPHHTVGDVLEAKV 160 
WD40-rpts                                                                                      

Query      161 RHGFSGIPITETGKMGSKLVGIVTSRDIDFLSEKDNNKYLEEAMTKREDLVVAPAGVTLKEANDILQRSKKGKLPIVNDK 240 
WD40-rpts                                                                                      

Query      241 DELVAIIARTDLKKNRDYPLASKDSRKQLLCGAAIGTREDDKYRLDLLTQSGVDMVVLDSSQGNSVYQINMIHYIKQKYP 320 
WD40-rpts                                                                                      

Query      321 ELQVVGGNVVTAAQAKNLIDAGVDALRVGMGCGSICITQEVMACGRPQGTSVYKVAEYARRFGVPVIADGGIQTVGHVVK 400 
WD40-rpts                                                                                      

Query      401 ALSLGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKNTSSQKRYFSEGDKVKVAQGVSGSVQDKGSIHK 480 
WD40-rpts                                  (_____________________WD 1_____________________)    

Query      481 FVPYLIAGIQHGCQDIGAKSLSVLRSMMYSGELKFEKRTMSAQVEGGVHGLHSFEKRLY 539 
WD40-rpts                                                                 

1 WD40-repeats found in QUERY=ENSDARP00000066972 (Len=539):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 13   429-476      2.82  231.02  0.04691       22.5%     11.97

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  429-476    DGVRLKKYRGMGSLDAMEKNTSSQKRYFSEGDKVKVAQGVSGSVQDKG

   WD40 Template    TGECLRTLSGHTS--------GVTSVSFSPDGKRLVSGSEDGTIKVWD