Input parameters:

  Query = ENSDARP00000065277 (Len=755)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000065277, Len=755):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 GTHVYTLNGSDPEGDPVTFGVTFDKGSKQFFSVEPKSGRVTLVEHLDRELQDEIIASVSITDGCVQVVESVRVFITDVND 80  
WD40-rpts                                                                                      

Query       81 EKPEFMNLPLRVDVPEVNVDIQAVDRDLGSGGSVSYFLQSSPDGLFSIDGHSGVLRVRERLDFETSRTHFITVVAKGKYH 160 
WD40-rpts                                                                (_________________WD 1

Query      161 GKYQVLSSTAVITIHVQDVQDSPPVFVGTPYFGFVYEVSVPGSEIFTVFAKDGDQSSPNPIHYSILNEGSDGFFSINSSS 240 
WD40-rpts      _________________)                                                              

Query      241 GCISLVSFPVQLRNELYELRVQAAEVGADGVLADSSITTVTIRVVDLNNHPPTFYGESGQQNHFDISMYEHPAEGEILRG 320 
WD40-rpts                                                                                      

Query      321 LKITVNDSDQGANAKFRLVLVGPSRVLRVVPQTVLNEAQVTVIVENSSAIDYEKHQFLTFKVRFCSIDTPERFSATADIV 400 
WD40-rpts                                                                                      

Query      401 INLLDTNDNTPKFSSEFYIARIPENSPGGSNVVSVTATDPDSGLWGEVKYSIYGSGADLFLIHPSSGIIYTQPWAALDAE 480 
WD40-rpts                                                                                      

Query      481 VKSKYNFYVKAEDTEGKYSLAEVFVTVLDQNDHPPEFNENFLEKTMIIGAPVKIQAVDEDAEEPNNLIEYSIMKADPDNI 560 
WD40-rpts                                                                                      

Query      561 FDINTSTGEIKLKPYIKSLEIVQNISRQRECRWSVVVQARDRGSPSFSTTAVVKIDITEANRFNGPMSTFLKQSRENPLQ 640 
WD40-rpts                                                                                      

Query      641 VLVLALSGITAMVLLTVLISTIIYCRNTKSNRIMPARRIIRRRAKEAQHWSFRPAFGQTEPGPAVPEEEESGGNQNTNNN 720 
WD40-rpts                                                                                      

Query      721 SSSPGAHSPTPGAPAPPPRAPAPRAPAPTPAPRAP 755 
WD40-rpts                                         

1 WD40-repeats found in QUERY=ENSDARP00000065277 (Len=755):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 11   139-178      2.81  230.84  0.04717       20.0%      3.05

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  139-178    ERLDFETSRTHFITVVAKGKYHGKYQVLSSTAVITIHVQD

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD