Input parameters:

  Query = ENSDARP00000065096 (Len=567)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000065096, Len=567):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSYQGKKNIPKITSERLLIKGGRIVNDDQSFYADIYMEDGVIKQIGDNLIVPGGVKTIEANGKMVIPGGIDIHTHLQMPF 80  
WD40-rpts                                                                                      

Query       81 RGTTTADDFTQGTKAALAGGTTMIVDHVIPEPGCSLLEAFDRWSKWADEKACCDYSLHVDITHWNDSVKQEVETLIKEKG 160 
WD40-rpts                                                                                      

Query      161 VNSFQVYMAFKDLYQMSNTELYEVFTFLGEHGGIAQVHAENGEIIAEEQARMLEMGITGPEGHVLSRPEELEAEAVFRAV 240 
WD40-rpts                                                                                      

Query      241 TIASQTNCPLYVTRVMSKSAADIISQARKKGNVVFGEPITASLGTDGTHYWSKNWAKAASFVTSPPLSPDPTTPDYLNTL 320 
WD40-rpts                                                                                      

Query      321 LASGDLSVVGSAHCTFSVAQKAIGKDDFTQIPEGVNGAEERMSIIWDKAVVTGKMDENMFVAVTSTNAAKILNLYPRKGR 400 
WD40-rpts        (___________________________________________WD 1______________________________

Query      401 IAVGSDSDLVIWDTDAVRTITAKTHHSAAEYNVFEGMELRGAPMLVVCQGKIVLEDGNLHATSGTGRFIPCSPFPDFAYK 480 
WD40-rpts      ____________)                                                                   

Query      481 RVKARKQLAILKAVPRGMYDGPVSEFSPMSRGGTPSASTRTSPTKVPVRNLHQSGFTLSGPEEAPIRPAGRRIVVPPGGR 560 
WD40-rpts                                                                                      

Query      561 SNITSLS 567 
WD40-rpts             

1 WD40-repeats found in QUERY=ENSDARP00000065096 (Len=567):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 13   323-413      4.33  293.73  0.00683       20.0%     12.02

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  323-413    SGDLSVVGSAHCTFSVAQKAIGKDDFTQIPEGVNGAEERMSIIWDKAVVTGKMDENMFVAVTSTNAAKILNLYPRKGRIAVGSDSDLVIWD

   WD40 Template    TGECLRTLSGHTSGV--------TSVSFSPDGKR------------------LV-------------------------SGSEDGTIKVWD