Input parameters:

  Query = ENSDARP00000064667 (Len=936)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000064667, Len=936):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTRVNRKSRRRQKMIIYERTNIRSHRKKRRRERNRHERKPQRSLRRSSCNNELEKKKKKAKSSKHDAERSQAEVSAENQT 80  
WD40-rpts                                                                                      

Query       81 EIIQDDVEEFKEDTVKPKVKKKKKRKEVPVEEEQTEEKPAFDDSLVLGVYIHRTDKLKTDLMVSHPMVKVHVVDEVTGQY 160 
WD40-rpts                                                                                      

Query      161 VKKEDSHRHVSSFYEQENIEHILPIITQPFDFKKHKTTVPEWEEQIIFNERFGYFLQDDDESPRVMLLFELVGTNGVLNI 240 
WD40-rpts                                                                                      

Query      241 DTKLRLQLYCPPPRAKKVPQTVEVFQWWSKYPRNKYTSTLYVTVKGLKPPEHVDPGIRSMMALQQERGSTSYSELNSEMT 320 
WD40-rpts                                                                       (______________

Query      321 NKTSTQIQESKAETMKWSRMPGQVCRIPNKPMHSFRGGQMGCFTLCFSHDGRALAAACADRDAFPIIMWNVERLQTLAHK 400 
WD40-rpts      WD 1______________)         (__________________WD 2__________________)    (_____

Query      401 TLPHPSFVYCAKFHPQAQSLVATGGYDGVLRVWNVDVQDVNGQLLQEFDGHKTFINTLCFDPEGSRMFSADNSGLIIVWG 480 
WD40-rpts      ____________WD 3_________________)       (_________________WD 4________________)

Query      481 TKVMPGSRRGATSQWSIEREIKEADLNGISINSLEVHPNGRRLLIHAKDSVLRVMDLRILAVKKYIGATNYRDRINSTFT 560 
WD40-rpts                       (_________________WD 5________________)  (__________________WD 

Query      561 PCGSFIFAGSEDGLAYVWNSETGDQVAVYSELCYSSALRAVAFHPHENMVAFCCFGQNQPIHLYLYDRKVAQMEVESLRG 640 
WD40-rpts      6_________________)   (___________________WD 7__________________)             (_

Query      641 WSRSENLDSKTGRISSEFMSIQNPTATSMDRFANTARMSLKMQRVKQKLDSVLGLNSYLPPPSLLSPHSKLQMSSSLSAQ 720 
WD40-rpts      _________________WD 8_________________)   (___________________WD 9______________

Query      721 LIPQATLTSHTSGYSQAGQPIRRAPSLRQQKSFHDYEFSQQVETDLGQAHQTVVSLYEYRANRSDELSMRRGDVVHVLYK 800 
WD40-rpts      ____)              (_________________WD10________________) (_________________WD1

Query      801 DNDSWWFGRLVSGQEGYFPASYVADEGNFDEELSRALEAQPSLIDQPEEAEHATPVQMSAAISASGELKIISELDTDAEA 880 
WD40-rpts      1_________________)                                                             

Query      881 SSTTRKKKKKKVKRIEVPSEDLPPSSGSSRRRRPLPKLGQANGAFEGEGLNLRDLV 936 
WD40-rpts                                                              

11 WD40-repeats found in QUERY=ENSDARP00000064667 (Len=936):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 13   306-339      3.79  271.24  0.01369        7.5%     26.58
  WD 2:  Seg 17   349-390      7.39  419.90  0.00014       25.0%     52.73
  WD 3:  Seg 21   395-434      7.39  419.85  0.00014       27.5%     53.12
  WD 4:  Seg 25   442-480      9.68  514.53  7.2e-06       32.5%     54.11
  WD 5:  Seg 29   498-536      7.62  429.38  0.00010       20.0%     54.54
  WD 6:  Seg 33   539-579      7.49  424.11  0.00012       30.0%     51.76
  WD 7:  Seg 37   583-625      5.77  352.82  0.00109       17.5%     56.84
  WD 8:  Seg 42   639-679      7.59  428.19  0.00011       15.0%     44.56
  WD 9:  Seg 45   683-725      5.73  351.15  0.00115       15.0%     30.03
  WD10:  Seg 48   740-778      4.08  283.16  0.00947        5.0%     13.81
  WD11:  Seg 51   780-819      4.20  288.32  0.00808       12.5%     38.50

Multiple sequence alignment of 11 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  306-339    -------ERG--ST----SYSELNSE--MTNKTSTQ-IQES--KAE---TMKWSR
   WD 2  349-390    -N-KPMHSFR--GG----QMGCFTLC--FSHDGRAL-AAAC--ADRDAFPIIMWN
   WD 3  395-434    -Q-TLAHKTL--PH----PSFVYCAK--FHPQAQSLVATGG--YDG---VLRVWN
   WD 4  442-480    -G-QLLQEFD--GH----KTFINTLC--FDPEGSRM-FSAD--NSG---LIIVWG
   WD 5  498-536    -E-REIKEAD--LN----GISINSLE--VHPNGRRL-LIHA--KDS---VLRVMD
   WD 6  539-579    -I-LAVKKYI--GA----TNYRDRINSTFTPCGSFI-FAGS--EDG---LAYVWN
   WD 7  583-625    -G-DQVAVYSELCY----SSALRAVA--FHPHENMV-AFCCFGQNQ---PIHLYL
   WD 8  639-679    RGWSRSENLD--SK----TGRISSEF--MSIQNPTA-TSMD--RFA---NTARMS
   WD 9  683-725    -Q-RVKQKLD--SVLGLNSYLPPPSL--LSPHSKLQ-MSSS--LSA---QLIPQA
   WD10  740-778    -P-IRRAPSL--RQ----QKSFHDYE--FSQQVETD-LGQA--HQT---VVSLYE
   WD11  780-819    RA-NRSDELS--MR----RGDVVHVL--YKDNDSWW-FGRL--VSG---QEGYFP

   WD40 Template    TG-ECLRTLS--GH----TSGVTSVS--FSPDGKRL-VSGS--EDG---TIKVWD