Input parameters:

  Query = ENSDARP00000064467 (Len=575)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000064467, Len=575):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSGTGYQGKKNIPHLTSERLLIKGGRVVNDDQSLYADVYVEDGIIKQVGENLIVPGGVKVIEANGCMVIPGGIDVNTCLH 80  
WD40-rpts                                                                                      

Query       81 KPYLGTPPVDDFYQGTKAALAGGTTMIIDHVTPQPGDGLLEAFEKWQEAADKKSCCDYSLHVDIPHWHEGVKEELEQLVQ 160 
WD40-rpts                                                                                      

Query      161 EKGINSFQVYMAYKGLYQMPDSQLYEAFSFLKELGAVVLVHAENGDLIAQEQSKILGMGIIGPEGHPLSRPEELEAEAVF 240 
WD40-rpts                                                                                      

Query      241 RAITIGNRVNCPVYITKVMSKSAAETVAIARKKGSVVFGEPITASLATDGSHYWSKNWAKAAAYVTSPPLSPDPTTPEHL 320 
WD40-rpts                                                                                      

Query      321 HSLLACGDLQVVGSGHCAYSTSQKAIGKDNFTLIPEGTNGVEERMGFVWDKAVAMGKMDENQFVAVTSTNAAKIFNLYPR 400 
WD40-rpts           (___________________________________________WD 1___________________________

Query      401 KGRIAVGSDADIVIWDPDKIKTITAKSQQSALEYNIFEGMDCRGGPLHVVSQGRVVFEEGKLQVQQGTGRFISRKPFPDF 480 
WD40-rpts      _______________)                                                                

Query      481 AYQRIKYRNKIMNMQGVSRGMYDGPVYDVPATPKYITPAPSAKTSPTTHQPPPIRNLHQSNFSLSGSQIDDNIPRRSGHR 560 
WD40-rpts                                                                                      

Query      561 IVAPPGGRSNITSLG 575 
WD40-rpts                     

1 WD40-repeats found in QUERY=ENSDARP00000064467 (Len=575):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 14   326-416      4.52  301.50  0.00537       25.0%     11.73

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  326-416    CGDLQVVGSGHCAYSTSQKAIGKDNFTLIPEGTNGVEERMGFVWDKAVAMGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWD

   WD40 Template    TGECLRTLSGHTSGV--------TSVSFSPDGKR------------------LV-------------------------SGSEDGTIKVWD