Input parameters:

  Query = ENSDARP00000063550 (Len=633)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000063550, Len=633):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAGSANEEKTFKRFLELFLREMRPPIQEDVPLPTRPLSDLISEDEVEGECLDLCLQHLCKYNCPFSLAAALARGTADSIL 80  
WD40-rpts                                                                                      

Query       81 QSDLSLYHLNKSVEDGTETETETETETQTQIDSVKLARLVFNKLCETCSQWLKDFPYRRRHLPYYETSIHAIKNMRRKME 160 
WD40-rpts                                                                                      

Query      161 DKHVVIPDFNTLFNLQDQEEQAYFAVFDGHGGVDAANYAANHLHVNLVRQEMFSQDAGEALCHSFKLTDERFIKKAKSEN 240 
WD40-rpts                                                                                      

Query      241 LRCGTTGVVTFLRGRTLYVTWLGDSQVMMVKRGQPVELMKPHKPDREDEKKRIEALGGCVIWFGTWRVNGSLSVSRAIGD 320 
WD40-rpts                                     (______________________WD 1_____________________)

Query      321 SEHKPYICGDADCSTFNLDGSEDYLILACDGFYDTVNPEEAVRVVSDHLQENNGDTAMVAHKLVASARDAGSSDNITVIV 400 
WD40-rpts                                                                                      

Query      401 VFLRDPRLPPPSDEPEEQHDEEPLEDAGEEEEEEEAVDALQSELVCQDGGAENGGKNRGGWPLQQCSAPADLAYEDRMDS 480 
WD40-rpts                                                                                      

Query      481 FTDRTSLSITGPDVHAETGCFRIPASSGLPPTRTVTPDLIPSNSRAGAAWRPNQEDDPSGYRQKPQPKPRVPSYMQTTSD 560 
WD40-rpts                                                                                      

Query      561 GQLLEVAALFSQEGRKKRRLDVLPLRRESQRLTRRARESHGPLSCFPSVPYPLRSSERKPGIAFPHVTHSKRV 633 
WD40-rpts                                                                               

1 WD40-repeats found in QUERY=ENSDARP00000063550 (Len=633):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   272-320      2.85  232.40  0.04499       17.5%      2.89

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  272-320    RGQPVELMKPHKPDREDEKKRIEALGGCVIWFGTWRVNGSLSVSRAIGD

   WD40 Template    TGECLRTLSGHTSGV---------TSVSFSPDGKRLVSGSEDGTIKVWD