Input parameters:

  Query = ENSDARP00000061680 (Len=194)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000061680, Len=194):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGQTATLPCRKGGTYVIELYEWFRKFLNECPSGLITLHEFRRHFCNGTVGKESAEYAEQIFRTLDNNGDGVVDFREYVTA 80  
WD40-rpts      (________________________________________________________________________WD 1___

Query       81 ISMLIEGSTVEKLRWSFKLYDKDKDGAITRSEMLEIMQAVYKMSVAASLTKPDPLTAEECTNRIFVRLDKDNNAIISQDE 160 
WD40-rpts      ____________________________________________________________________)           

Query      161 FIEGALNDEWIREMLECDPNTVKMERSLKGHTVL 194 
WD40-rpts                                        

1 WD40-repeats found in QUERY=ENSDARP00000061680 (Len=194):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-149      2.98  237.76  0.03823       30.0%     -5.94

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-149    MGQTATLPCRKGGTYVIELYEWFRKFLNECPSGLITLHEFRRHFCNGTVGKESAEYAEQIFRTLDNNGDGVVDFREYVTAISMLIEGSTVEKLRWSFKLYDKDKDGAITRSEMLEIMQAVYKMSVAASLTKPDPLTAEECTNRIFVRLD

   WD40 Template    TGECLRTLSGHT-------------------SGVTS------------VSFS---------------PDGKRL-----------VSGS---------------EDGTIK-------------------------VW------------D