Input parameters:

  Query = ENSDARP00000061364 (Len=2230)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000061364, Len=2230):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MASLVLEDGTTFKGRLFGAVSSVSGEVVFQTGMVGYPEALTDPSYKSQILTLTYPMIGNYGIPKDEDGEFGLSKWFESSQ 80  
WD40-rpts                                                                                      

Query       81 IHAAALIVGEVSENPSHWSAAKSLDEWLREQGIPGLQGVDTRCLTKKIREKGTMLGKLVVEGTPADNIPFDNPDARNLVK 160 
WD40-rpts                                                                                      

Query      161 EVSMKAPKVFNPEGTVRITAIDCGIKYNQIRCLCQRGARVTVVPWDQPLDSNDFDGLFISNGPGNPEYCKETVENIRKVA 240 
WD40-rpts                                                                                      

Query      241 CVENPKPIFGICLGHQLLSLVIGAKTYKMKYGNRGHNQPCIHKGTSRCYITSQNHGFAVDPETLPKDWDVLFTNANDQTS 320 
WD40-rpts                                                                                      

Query      321 EGIVHNHKPLFSVQFHPEHMAGPTDLVGLFDVFLDTVRDVKENKAGKSGDLTVKQRLMEHLTFPGSPDPNAFVRPRKVLV 400 
WD40-rpts                                                                                      

Query      401 LGSGGLSIGQAGEFDYSGSQAIKAMKEENIQTILINPNIATVQTSKGLADKVYFLPITPEYVTQVIKNERPDGVLLTFGG 480 
WD40-rpts                                         (________________________________WD 1________

Query      481 QTALNCGVELKKQGVLEKYKVRVLGTPVASIEMTEDRKIFVEKMEEINEHVAPSEAAMSVEQAVAAAERLGYPVLVRSAF 560 
WD40-rpts      ________________________)                                                       

Query      561 ALGGLGSGFANNRDEMITLVTQAFAHTSQVLVDKSLKGWKEIEYEVVRDAYDNCVTVCNMENIDPLGIHTGESIVVAPSQ 640 
WD40-rpts                                                                                      

Query      641 TLNDYEYNMLRNTAIKVIRHLGVVGECNIQYALNPESEQYYIIEVNARLSRSSALASKATGYPLAYVAAKLSLGIPLPVL 720 
WD40-rpts                                                                                      

Query      721 KNSVTNSTTANFEPSLDYCVVKVPRWDLSKFLRVSTKIGSSMKSVGEVMAIGRSFEEAFQKALRMVDENCVGFDHTIKPE 800 
WD40-rpts                                                                                      

Query      801 SEEELQTPTDKRIFVLAAALHAGYTVERLYELTKIDHWFLHKMKNIADHKKLLETYKQDESAMPPEIMRKAKQLGFSDKQ 880 
WD40-rpts                                                                                      

Query      881 IAQAVQSTELAVRKLRRDWKIFPVVKQIDTVAAEWPAQTNYLYLTYHGSESDVVFEQPHVMVIGSGVYRIGSSVEFDWCA 960 
WD40-rpts                                                                                      

Query      961 VGCIMELRKMGYKTIMVNYNPETVSTDYDMCDRLYFDEISFEVVMDIYEMENPEGVILSMGGQLPNNIAMSLHRQQCRIL 1040
WD40-rpts                                                                                      

Query     1041 GTSPEFIDNAENRFKFSRMLDTIGISQPRWKELSDTESAVNFCETVGYPCLVRPSYVLSGAAMNVAYSDTDMEKFLSSAV 1120
WD40-rpts                                                                                      

Query     1121 AVSKEHPVVISKFIQEAKEIDVDAVACDGEVIAIAVSEHVENAGVHSGDATLVTPPQDINQKTMERIKMIVHAIGQELQV 1200
WD40-rpts                                                                                      

Query     1201 TGPFNLQLIAKDDQLKVIECNVRVSRSFPYVSKTLGVDLVALATRVILGEEVEAVGLMRGNGIVGVKVPQFSFSRLAGAD 1280
WD40-rpts                                                                                      

Query     1281 VVLGVEMTSTGEVACFGENRYEAYLKAMLSTGFKIPKKNILLSIGSYKNKSELLPTVQTLESLGYNLYASLGTADFYTEH 1360
WD40-rpts                                                                                      

Query     1361 GVKVMAVDWPFEEESDCPNKDKQRNIMDYLEENHFDLVINLSMRNSGGRRLSSFVTKGYRTRRMAIDFSVPLITDIKCTK 1440
WD40-rpts                                                                                      

Query     1441 LFVQALKQIGQAPRVKTHVDSMTSQKLIRLPGLIDVHVHLREPGATHKEDFSSGTAAALAGGITMVCAMPNTNPAIIDPN 1520
WD40-rpts                                                                                      

Query     1521 SFTMAQKLAKAGCRCDYALFVGASSDNAALLPSIASSTAGLKMYLNDTYSTLKMDNVSLWMEHFEKWPKHLPIVAHAEKQ 1600
WD40-rpts                                                                                      

Query     1601 TVAAILLVAQLYQRPVHICHVAKKEEILIIRAAKQKGIQVTCEVAPHHLFLCEDNVPVIGKDKAQVRPMLGTREDMEALW 1680
WD40-rpts                                                                                      

Query     1681 ENLDIIDCFATDHAPHSAEEKISEKPPPGYPGLETMLPLLFTAVSEGRLTVDDIIKRLYENPRKIFSLPAQEDTYVEVDL 1760
WD40-rpts                                                                                      

Query     1761 EQEWIIPKHMQFTKSKWTPFEGMKVKGKVMRVVLRGEVAYIDGQVLVPPGYGQDVKSWSATPTATTEVIMDAPKRVIEAM 1840
WD40-rpts                                                                                      

Query     1841 TPERPRQAAPVDVVRSRAPSPRRSAGDGRFILPPRIHRSSDPGLPPELALPAEAYAHPPPLARILSPQAGQPQILPHPQT 1920
WD40-rpts                                                                                      

Query     1921 SPLLHPLVGQHILSVRQFSKEQMSHLFNVAHTLRLMVQKERPLDILKGKVMASMFYEVSTRTSSSFAAAMHRLGGSVVHF 2000
WD40-rpts                                                                                      

Query     2001 CESTSSTQKGESLVDSVNTMSCYADVIVLRHPIPGAVESAARHCRRPVINAGDGVGEHPTQALLDIFTIREELGTVNGMT 2080
WD40-rpts                                                                                      

Query     2081 ITMVGDLKHGRTVHSLARLLTQYRITLRYVAPKNLSMPAEIIDFVASKGIKQEEFNSIEEALPDTDVLYMTRIQKERFSS 2160
WD40-rpts                                                                                      

Query     2161 EKEYNACFGQFILTPHIMTGAKRKMVVMHPLPRVNEISVEVDTDPRAAYFRQAENGMYIRMALLATVLGR 2230
WD40-rpts                                                                            

1 WD40-repeats found in QUERY=ENSDARP00000061364 (Len=2230):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 17   436-505      2.79  229.79  0.04869       25.0%      3.26

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  436-505    NPNIATVQTSKGLADKVYFLPITPEYVTQVIKNERPDGVLLTFGGQTALNCGVELKKQGVLEKYKVRVLG

   WD40 Template    TGEC--LRTLSGHTSGVTSVSFS------------PDGKRLVSGS----------------EDGTIKVWD