Input parameters:

  Query = ENSDARP00000060548 (Len=617)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000060548, Len=617):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MADDTQEVPQLALEAVIGFNGHVFSGLKVHPDKEHLIYPLGCTVIIKSLRSGKQSFLHGHTNNVSCISVSKSGRYIASGQ 80  
WD40-rpts           (___________________WD 1__________________)  (___________________WD 2______

Query       81 VTFMGFKADVIIWDYEKKEIYARLLLHKAKVEDLSFSPNDKYLVSLGGQDDASIVVWNIESKEAICGSPASAQSAGHCLA 160 
WD40-rpts      _____________)   (__________________WD 3_________________)        (_____________

Query      161 LEYTNLSDEIFVSAGNGTLRVWELDLLNRKIRPTECQTGQLKRIVKCLEIPNDDNYFYCGTTSGDILKVNLKTRLLNSCG 240 
WD40-rpts      ___WD 4_______________)    (___________________WD 5__________________)      (___

Query      241 PVKQKFSKGVNTLKVLKTGDILVGSGDGMLTLCSGANFKTIKSVQLEGGVTSVTLRGDGHQFYVGTEAAQMYSLSYTDFK 320 
WD40-rpts      _____________WD 6________________)(__________________WD 7_________________)   (_

Query      321 PELTATNHNSAVKDVAFPFGTSELFATCSHNDIRVWHSESSKELLRITVPNITCHALGFMRDGRSIFSAWNDGKIRVFTP 400 
WD40-rpts      ________________WD 8________________)   (_________________WD 9________________)(

Query      401 ESGKLKLIIHNAHSMAVTTIAATNDCKRIVSGGGEGQVRVWEIFQDSYRLIETMKEHKATVNCIKIKSNDKECVTASSDG 480 
WD40-rpts      ___________________WD10__________________)     (_________________WD11___________

Query      481 ACIIWDLVRFVRNQMVLSNTLFSVVCYHPEEYQIITSGTDRKIGYWEVYDGSAIRELEGSLSGSINGMHISEDGKYFVTG 560 
WD40-rpts      _____)(__________________WD12_________________)   (_________________WD13________

Query      561 GDDKLLKLWLYSDGEVTHVGIGHSGSITNVRICPNSRYIVSTSADGAILRWRYPQTA 617 
WD40-rpts      _________)   (_________________WD14________________)     

14 WD40-repeats found in QUERY=ENSDARP00000060548 (Len=617):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     6-48       3.68  266.77  0.01571       10.0%     43.09
  WD 2:  Seg  5    51-94       7.26  414.45  0.00016       30.0%     53.73
  WD 3:  Seg  9    98-138      8.30  457.57  4.2e-05       42.5%     49.14
  WD 4:  Seg 14   147-183      6.40  379.17  0.00048       10.0%     47.01
  WD 5:  Seg 17   188-230      5.57  344.91  0.00140       17.5%     56.29
  WD 6:  Seg 21   237-274      6.17  369.68  0.00065       25.0%     45.72
  WD 7:  Seg 24   275-315      6.57  386.24  0.00039       25.0%     52.67
  WD 8:  Seg 28   319-357      8.17  452.02  5.0e-05       25.0%     57.25
  WD 9:  Seg 32   361-399      8.27  456.26  4.4e-05       22.5%     56.87
  WD10:  Seg 36   400-442      8.49  465.29  3.3e-05       32.5%     56.51
  WD11:  Seg 40   448-486      8.94  483.94  1.9e-05       25.0%     55.59
  WD12:  Seg 44   487-527      6.73  392.85  0.00032       15.0%     54.70
  WD13:  Seg 48   531-570      8.29  457.05  4.3e-05       37.5%     58.95
  WD14:  Seg 52   574-612      9.20  494.62  1.3e-05       35.0%     58.28

Multiple sequence alignment of 14 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    6-48     QEVPQLA---LEA-VIG-FNGHV----FSGLKVHPDKEHLIY--PL------GCTVIIKS
   WD 2   51-94     -S----G---KQS-FLH-GHTNN----VSCISVSKSGRYIAS--GQVTFMGFKADVIIWD
   WD 3   98-138    -K----E---IYA-RLL-LHKAK----VEDLSFSPNDKYLVSLGGQD-----DASIVVWN
   WD 4  147-183    GS----P-------ASA-QSAGH----CLALEYTNLSDEIFV--SAG-----NGTLRVWE
   WD 5  188-230    -N----R---KIR-PTE-CQTGQLKRIVKCLEIPNDDNYFYC--GTT-----SGDILKVN
   WD 6  237-274    -N----S---CGP-VKQ-KFSKG----VNTLKVLKTGDILV---GSG-----DGMLTLCS
   WD 7  275-315    GA----N---FKT-IKSVQLEGG----VTSVTLRGDGHQFYV--GTE-----AAQMYSLS
   WD 8  319-357    -F----K---PEL-TAT-NHNSA----VKDVAFPFGTSELFA--TCS-----HNDIRVWH
   WD 9  361-399    -S----K---ELL-RIT-VPNIT----CHALGFMRDGRSIFS--AWN-----DGKIRVFT
   WD10  400-442    PE----SGKLKLI-IHN-AHSMA----VTTIAATNDCKRIVS--GGG-----EGQVRVWE
   WD11  448-486    -Y----R---LIE-TMK-EHKAT----VNCIKIKSNDKECVT--ASS-----DGACIIWD
   WD12  487-527    LV----R---FVRNQMV-LSNTL----FSVVCYHPEEYQIIT--SGT-----DRKIGYWE
   WD13  531-570    -G----S---AIR-ELE-GSLSG---SINGMHISEDGKYFVT--GGD-----DKLLKLWL
   WD14  574-612    -G----E---VTH-VGI-GHSGS----ITNVRICPNSRYIVS--TSA-----DGAILRWR

   WD40 Template    TG----E---CLR-TLS-GHTSG----VTSVSFSPDGKRLVS--GSE-----DGTIKVWD