Input parameters:

  Query = ENSDARP00000059751 (Len=847)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000059751, Len=847):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MMDIAYVCEWEKRPKSNHCPSIPLVCAWSCRNLIAFTTDLKNEEDDKGLDNAFITNITTPVDLSHMIHIIDTDHPWDVYS 80  
WD40-rpts                                                                            (_________

Query       81 INSGHNEIISCLEWDQSGSRLLSADGDGQIKCWGMTEHLVNSWECAQSSSVDGDPIVALSWLHNGVKLALHVEKSGSTNF 160 
WD40-rpts      __________WD 1___________________)                                              

Query      161 GEKFSRVKFSPSLTLFGGKPMEGWLAVTVSGLVTVSLLKPNGTLLTASESLCRLRGRVALADIAFTGGGNIVVAATDGSS 240 
WD40-rpts                                                                                      

Query      241 SSPVQFYKVCVSVVNEKCRIDTELLPSLFMRCTTDPLRRDKYPAVTHLKFLTRENSEQVLLCASSQMGSIVECWSLRKEG 320 
WD40-rpts                                                                                      

Query      321 LPVNNIFQHRSPVVGEKQPMTLKWRILSTTNDLDRVSAVALPKLPISISNTDLKVASDTKFFPGLGLALAFHDGSIQILH 400 
WD40-rpts                                                                                      

Query      401 RLSLQTVGMFYGSSGSSQRVGEEPAIKRQRAGGPMLHFKALQFSWTSLALVGIDNHGKLHMFRVSPSMGQMLDMNTLLRH 480 
WD40-rpts                                                                                      

Query      481 LLFLLEYCMVTGYDWWDVLLHAQPGMVHNLLEKLHEEYMRQNQALQQVLSTRIVAVKASLCKLSSATAARACDFHAKLLL 560 
WD40-rpts                                                                                      

Query      561 IAISSTLKSLLRPHVLNTPDKSPGDRLSEICAKNTDTDIDKVMINLKTEEFVLDGPPLQSLQQLIQWVGDFVLYLLANLP 640 
WD40-rpts                                                                                      

Query      641 NQGSIVRPGFGFLRDGASLGMLREMLVMIRIWGLLKPGCLPIYTATSDNQDSMFLLFRLLTKLWLCSRDESHPQDPDETL 720 
WD40-rpts                                                                                      

Query      721 IDECCLLPSQLLVPSMDWLPINDGVITKIQGKHQLRLQFGKPYTLPGVNPNAQVEIFRSPASQRVDHLRCLHLGISPTED 800 
WD40-rpts                                                                                      

Query      801 SKACTRCGCVTMLRSPNKTNATRQWEQRWIKNCLCGGLWRRIPSTLS 847 
WD40-rpts                                                     

1 WD40-repeats found in QUERY=ENSDARP00000059751 (Len=847):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5    71-114      5.26  331.83  0.00210       30.0%     50.28

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   71-114    DTDHPWDVYSINSGHNEIISCLEWDQSGSRLLSADGDGQIKCWG

   WD40 Template    TGE----CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD