Input parameters:

  Query = ENSDARP00000059666 (Len=832)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000059666, Len=832):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVEKTDIRVVRCGGSKINFRPPIISHDSRFVLCVSGDSVKVYSTRTEEWLHNLQGHNNQVTGIAFNPANQLQVYSCSADG 80  
WD40-rpts          (_________________WD 1________________)   (_________________WD 2____________

Query       81 TVKLWDFIDGILIKTFVIGYPLYSLYVSEKHEGVIFLIVSMVTDSNNESFQLVAVHLPKSAEQEVEAKELSTVASKISPN 160 
WD40-rpts      _____)(_____________________WD 3_____________________)  (__________________WD 4_

Query      161 PSCTAFGRGGEFIAFSRHLQLNVYFFRKQKTYSFSLKATDKKAGKNAFTCVACHPTDDCIASGHEDGKIRLWRNFNHKKE 240 
WD40-rpts      ________________)                 (_________________WD 5________________)      (

Query      241 YTYSTKHWHHDAVNHLCFTPEGSNLLSGGIESVLVQWQYGDMSKKEFLPRLGGSISHVSASADGQLFCTAHSDNKISIIE 320 
WD40-rpts      _________________WD 6________________)   (_________________WD 7________________)

Query      321 SSFKVSGLIQGLVRGDAVSTDLMIDPRSKALVLNGKPGHLQFYSLLRDKHLYNLDIVQQEYIYEAGLDQFEVVKAVFDVK 400 
WD40-rpts           (_________________WD 8________________)              (_____________________

Query      401 GSWLATVEERGHKTSDLEFFLKLWAFDETTQSFVLNTTVTEAHSERITSMCFSSSEETTMLVTTALDGQFKAWCQTADAQ 480 
WD40-rpts      WD 9____________________)          (_________________WD10________________)      

Query      481 QAQNYWSCDFVGSYHNLKPKNCCFSADGSILAVSFQEVLTLWSPETWELLTTLCQPPGEIRDLCFGRLSCSKYLLSTTTK 560 
WD40-rpts           (________________WD11________________)   (__________________WD12___________

Query      561 NLLCCWNLLTCALEWSTSVDVSRLQSDPLSENVAAFSFESKHTHLFVFKPSEPRPLFSQRYVCLERVDRAVFVPREEPFN 640 
WD40-rpts      ______)   (_________________WD13________________)(___________________WD14_______

Query      641 SCDESCQWLNRSQLYFLTHNMDLLTFSSATEEDRMLSSSKRLVIDESVAVTPFYLLLGRHRKQQHKLNTETQEPADKPQH 720 
WD40-rpts      ___________)                                                                    

Query      721 TQGSVTIKQLLHTPAHVLPAASVLCSMFVRSLLISNTGVREEMDSSEQEMDSEKEEEESEEEMEACDGQQELRAQGSVDE 800 
WD40-rpts                                                                                      

Query      801 QKPKLSKAQERELKSLRKTDFSWMTSLIDSKP 832 
WD40-rpts                                      

14 WD40-repeats found in QUERY=ENSDARP00000059666 (Len=832):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     5-43       6.02  363.21  0.00079       20.0%     56.22
  WD 2:  Seg  5    47-86       9.01  486.92  1.7e-05       42.5%     58.41
  WD 3:  Seg  9    87-134      4.61  305.03  0.00482       15.0%     50.08
  WD 4:  Seg 13   137-177      3.94  277.60  0.01125       10.0%     39.04
  WD 5:  Seg 19   195-233      8.12  450.04  5.3e-05       25.0%     49.04
  WD 6:  Seg 22   240-278      8.33  458.67  4.1e-05       25.0%     49.96
  WD 7:  Seg 26   282-320      7.87  439.90  7.3e-05       20.0%     57.63
  WD 8:  Seg 30   326-364      7.53  425.76  0.00011       17.5%     51.24
  WD 9:  Seg 35   379-425      5.90  358.20  0.00093       20.0%     53.32
  WD10:  Seg 40   436-474      6.72  392.45  0.00032       27.5%     46.30
  WD11:  Seg 43   486-523      5.75  352.27  0.00111       22.5%     48.42
  WD12:  Seg 47   527-567      6.57  386.26  0.00039       22.5%     56.92
  WD13:  Seg 51   571-609      5.22  330.34  0.00220       15.0%     26.16
  WD14:  Seg 55   610-652      4.40  296.28  0.00631       15.0%     37.78

Multiple sequence alignment of 14 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    5-43     TDI---RV-VRCGGSKINFRPPIIS--H--DSR-FV-----LCVSG--------D-SVKVYS
   WD 2   47-86     -EE---WL-HNLQGHNNQVTGIAFN--P--ANQLQV-----YSCSA--------DGTVKLWD
   WD 3   87-134    FIDGILIK-TFVIGYPLYSLYVSEK--H--EGV-IFLIVSMVTDSN--------NESFQLVA
   WD 4  137-177    LPK---SAEQEVEAKELSTVASKIS--P--NPS-CT-----AFGRG--------GEFIAFSR
   WD 5  195-233    SLK----A-TDKKAGKNAFTCVACH--P--TDD-CI-----ASGHE--------DGKIRLWR
   WD 6  240-278    -EY---TY-STKHWHHDAVNHLCFT--P--EGS-NL-----LSGGI--------ESVLVQWQ
   WD 7  282-320    -MS---KK-EFLPRLGGSISHVSAS--A--DGQ-LF-----CTAHS--------DNKISIIE
   WD 8  326-364    -SG---LI-QGLVRGDAVSTDLMID--P--RSK-AL-----VLNGK--------PGHLQFYS
   WD 9  379-425    -QE---YI-YEAGLDQFEVVKAVFD--V--KGS-WL-----ATVEERGHKTSDLEFFLKLWA
   WD10  436-474    N------T-TVTEAHSERITSMCFS--SSEETT-ML-----VTTAL--------DGQFKAWC
   WD11  486-523    -WS---CD-FVGSYHNLKPKNCCFS--A--DGS-IL-----AVSF---------QEVLTLWS
   WD12  527-567    -WE---LL-TTLCQPPGEIRDLCFGRLS--CSK-YL-----LSTTT--------KNLLCCWN
   WD13  571-609    -CA---LE-WSTSVDVSRLQSDPLS--E--NVA-AF-----SFESK--------HTHLFVFK
   WD14  610-652    PSEPRPLF-SQRYVCLERVDRAVFV--P--REE-PF-----NSCDE--------SCQWLNRS

   WD40 Template    TGE---CL-RTLSGHTSGVTSVSFS--P--DGK-RL-----VSGSE--------DGTIKVWD