Input parameters:

  Query = ENSDARP00000054976 (Len=1482)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000054976, Len=1482):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MALSTNLCRVTLGVEGMTCGSCVQSIEGRIGGLPGVIHIQVSLEQNNATVTYDHTQHTPQSIADAIEDMGFESSLTNATS 80  
WD40-rpts                                                                                      

Query       81 TPVQTETKVFSKAGCSADSVQQALSTLAQIKGVIETQESADNQGLAVTFVPSLVSEDQLGEVLKCLAPDTACRPPLSPKE 160 
WD40-rpts                                                                                      

Query      161 GSTSRSFSGVEAVKMRIEGMVCLSCTTTIEGKIGKLKGVEKIKVSLESQEAAVVYLPYIITVDEIVKQIEVAGFKATVKS 240 
WD40-rpts                                                                                      

Query      241 KPRQLKLSASEVERLLSAPKQTEEKLSEPPADSTVTTLFQVTGMHCNSCVVNIQDNISKLPAVTSVVVSLENRQASIQHN 320 
WD40-rpts                                                                                      

Query      321 PKQVSAVELQKAIEALPPGNFKAIIPASPEPGFLQPLVSVAEIHIEGMTCGSCVQSIEGTLSQKKGVRSAQVSLANHKGT 400 
WD40-rpts                                                                                      

Query      401 FEYDPLLTSPEELRAAIEDMGFDAFLPETNSLVPSVVKSPSLSVRSSSLSPVRSAVKENEAESDAEPSTNTISKCFIQIG 480 
WD40-rpts                                                                                      

Query      481 GMTCASCVANIERNLKNEYGIHSVLVALMASKAEVRYSPSVIDPLRIAELIRELGFTATVMDNYDGSDGSLELVVRGMTC 560 
WD40-rpts                                                                                      

Query      561 ASCVHKIESNLMKQKGILYASVALSTNKAHIKYDPEVTGPRDIIRLIENMGFTASLVKKDRPGSHLDHSREIRQWKRSFQ 640 
WD40-rpts                                                                                      

Query      641 ISLFFCVPVMGMMIYMIVVDHMIDKYHQHHNATAEDRAKYHSTMFLEKQLLPGLSIMNLISFLFCVPVQFIGGRYFYCQA 720 
WD40-rpts                                                                                      

Query      721 YKAVKHRTANMDVLIVLATTIAFTYSVVVLLVAMVERAKVNPITFFDTPPMLFVFISLGRWLEQIAKSKTSEALSKLMSL 800 
WD40-rpts                                                                                      

Query      801 QATEATVVTLNEDMSVLSEEQVDVELVQRGDVVKVVPGGKFPVDGRVIEGHSMADESLITGEAMPVTKKPGSTVIAGSIN 880 
WD40-rpts                                                                                      

Query      881 QNGSLLIKATHVGTDTTLSQIVKLVEEAQTSKAPIQQFADKISSYFVPFIVVISVLTLLAWIIIGFVNFSLVQTYFPGYD 960 
WD40-rpts                                                                                      

Query      961 KSISEAEAVIRFAFQASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKIQSVVFDKTGTITYGAPK 1040
WD40-rpts                                                                                      

Query     1041 VVQVKMLAEGNRLPRSKLLAIVGTAENSSEHPLGAAITKYCKQELGTESLGTCTDFQAVPGCGIRCLVSNTENLLKREDS 1120
WD40-rpts                                                                                      

Query     1121 DSEENQHNAVLIQISDARAHSTEHPLIMDPQPLTVVQTASYTVLIGNREWMRRNALQVRADVDEAMTEHERRGCTAVLVA 1200
WD40-rpts                                                                                      

Query     1201 VDNELCAMVAIADTVKPEAELAVHVLSAMGLEVVLMTGDNSKTARAIAAQVGIRKVFAEVLPSHKVAKVEQLQQEGKRVA 1280
WD40-rpts                                  (___________________________________________WD 1____

Query     1281 MVGDGVNDSPALAMADVGIAIGTGTDVAIEAADVVLIRNDLLDVVGSIDLSKKTVKRIRINFVFALMYNLVGIPIAAGVF 1360
WD40-rpts      _______________________________________)                                        

Query     1361 MPVGLVLQPWMGSAAMALSSVSVVLSSLLLKCYTKPTVEKLKRRLGDVRTHGSLSDVSVHIGMGELRRPSPKLSLLDRFV 1440
WD40-rpts                                                                                      

Query     1441 NYSRASINSLRSDKHSMNSMALSEPDKHSLLVGDDHCDNEIV 1482
WD40-rpts                                                

1 WD40-repeats found in QUERY=ENSDARP00000054976 (Len=1482):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 37  1229-1320     3.70  267.44  0.01539       22.5%     15.30

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1 1229-1320   MGLEVVLMTGDNSKTARAIAAQVGIRKVFAEVLPSHKVAKVEQLQQEGKRVAMVGDGVNDSPALAMADVGIAIGTGTDVAIEAADVVLIRND

   WD40 Template    TGECLRTLSGHT-----------------SGVTS----------------VSFSPDGKRL-------VSG---S---------EDGTIKVWD