Input parameters:

  Query = ENSDARP00000054234 (Len=511)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000054234, Len=511):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MTEDVQKHSVHTLVFRSLKRTHDMFVADHAKPIAQDEQSFKVKMAAKMRAEYKAVLHMPVLKEGREKGSLHTSDPYGQSA 80  
WD40-rpts                              (_________________WD 1_________________)   (____________

Query       81 YPLPDTTPEYLVTGTHPYPSAPGVALTADTQMLKMPSEMGVHSMALALPPSQARQEASRTAASVAEIHRHAGGAERSHPP 160 
WD40-rpts      _____WD 2________________)   (_________________WD 3________________)(___________

Query      161 QHALSLMEGGTRTLVPRKAPTMPKPQWHPPWKLYRVISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLT 240 
WD40-rpts      ______WD 4________________)   (_________________WD 5________________)   (_______

Query      241 GHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKANV 320 
WD40-rpts      __________WD 6________________)   (_________________WD 7________________)   (___

Query      321 HTLSGHTNTVATVKCQSAEPQVVTGSHDTTIRLWDLVAGKTRATLTNHKKSVRALVLHPRQYTFASGSPDNIKQWKFPDG 400 
WD40-rpts      ______________WD 8________________)   (________________WD 9________________)   (

Query      401 NFIQNLSGHNAIINTLAVNSDGVLVSGADNGTIHMWDWRTGYNFQRIHAAVQPGSLDSESGIFSCVFDQSESRLITAEAD 480 
WD40-rpts      ________________WD10________________)           (_________________WD11__________

Query      481 KTIKVYKEDDTATEESHPVNWKPEILKRKRF 511 
WD40-rpts      ______)                        

11 WD40-repeats found in QUERY=ENSDARP00000054234 (Len=511):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    25-64       6.91  400.00  0.00025        2.5%     22.35
  WD 2:  Seg  5    68-106      4.77  311.61  0.00393       10.0%      6.53
  WD 3:  Seg  8   110-148      4.59  304.26  0.00493       10.0%     37.83
  WD 4:  Seg 11   149-187      4.13  285.44  0.00883       10.0%     20.62
  WD 5:  Seg 14   191-229     10.10  532.06  4.2e-06       40.0%     53.49
  WD 6:  Seg 18   233-271      9.59  510.94  8.1e-06       37.5%     56.20
  WD 7:  Seg 22   275-313      9.54  508.78  8.6e-06       35.0%     55.82
  WD 8:  Seg 26   317-355      9.93  524.95  5.2e-06       40.0%     53.72
  WD 9:  Seg 30   359-396      7.95  442.99  6.7e-05       32.5%     52.15
  WD10:  Seg 34   400-437      8.75  476.05  2.4e-05       40.0%     52.76
  WD11:  Seg 39   449-487      8.06  447.49  5.8e-05       27.5%     38.58

Multiple sequence alignment of 11 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   25-64     FVADHAKPIAQDEQSFKVKMAAKMRAEYKAVLHMPVLKEG
   WD 2   68-106    -GSLHTSDPYGQSAYPLPDTTPEYLVTGTHPYPSAPGVAL
   WD 3  110-148    -TQMLKMPSEMGVHSMALALPPSQARQEASRTAASVAEIH
   WD 4  149-187    -RHAGGAERSHPPQHALSLMEGGTRTLVPRKAPTMPKPQW
   WD 5  191-229    -WKLYRVISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWD
   WD 6  233-271    -GKLKLSLTGHISTVRGVAVSNRSPYLFSCGEDKQVKCWD
   WD 7  275-313    -NKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWD
   WD 8  317-355    -KANVHTLSGHTNTVATVKCQSAEPQVVTGSHDTTIRLWD
   WD 9  359-396    -GKTRATLTNHKKSVRALVLHPRQYTFASGSPD-NIKQWK
   WD10  400-437    -GNFIQNLSGHNAIINTLAVNSDGV-LVSGADNGTIHMWD
   WD11  449-487    -AAVQPGSLDSESGIFSCVFDQSESRLITAEADKTIKVYK

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD