Input parameters:

  Query = ENSDARP00000046545 (Len=1455)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000046545, Len=1455):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAVYFDHRAEAPDSSGVPVLISWHSSVCVLAVGSVNPSTGGCVDLYLQQGEHVELCHVERGFSPSLLQWHPNKPLLAVGW 80  
WD40-rpts      (_____________________WD 1____________________)   (_________________WD 2________

Query       81 ETGETILLSHPSGEHTPLPNNTHTACITVLEWSSNGSRLVTGDQAGVMAVWKVDARGKLQGSPLIKHDYSRPLTCCIFRP 160 
WD40-rpts      ________)    (_________________WD 3________________)      (_________________WD 4

Query      161 PPPAEDVAMLARAAVSGDENALDMFNWKKSSKGAAFALGSQEGLAFYISTADGSVYSVDEQVKSVPLLSVESAVHKMWYS 240 
WD40-rpts      _________________)  (_________________WD 5________________)(_________________WD 

Query      241 KRRSALAVVTDSLQLSQFSLGPEGFAQEISKVKLSGRGGPNADVVWTEGGLLITASGELHIRLWHVELDDHYALSLDESL 320 
WD40-rpts      6_________________)(____________________WD 7____________________)          (____

Query      321 GFEKGERLNCVSFCTSKQVLAAGTSRGRVALWHMLTVSDQKGDSKTQWKLQTPAEVEGNISQLQWGSSAHLLAVCSSSSV 400 
WD40-rpts      ____________WD 8________________)             (_________________WD 9____________

Query      401 VILSEHVMCSHYSQQMAAVQLTPTQLSLANFTSASKYSLLFGIIFIMHVYIAYYSKNMVAVWNGKMITVYEPSGQTLHST 480 
WD40-rpts      ____)                                                                           

Query      481 GSFQCESPALALHEENIYTIEPNRVQIRTPQGTVKQLLVFSEAEGNPTLLSVCGSYLAVGTDTCHIRVFDLTRREAKPLG 560 
WD40-rpts                                     (_________________WD10________________)          

Query      561 VTKNLSELISDLGALRSVKCNASGSQISVLITQVINGRPDNRVYFYDIELDTLSYFDFFTGRPQSSPEQSEICRSRCEEE 640 
WD40-rpts                                                                                      

Query      641 LAARCPVSQFWDENEPRLFVCETVSVNSDLHGSRQRQTEKEMMPSLFIEFCTKEEDVMVVTFFVTQEHGLLLQDSQPKPA 720 
WD40-rpts                                                                                      

Query      721 ALLGLLALDTPYYYYICKPADLYLNKLINSAQSSSPQMVVRQALRDFVGLESCEKQTRDAMLNFSFYLTIGDMDEAFKAI 800 
WD40-rpts                                                                                      

Query      801 KLIKSEAVWENMARMCVKSRRLDVARVCLGNMGNARAARALRDAEKEPEVEAQVAVLATQLGMLEDAEQLYKSCGRFDLL 880 
WD40-rpts                                                                                      

Query      881 NKFYQAAGQWQQAVETAETHDRIHLRTTYYSYAKHLEAMGDKNLALVYFEKSDTHRFEVPRMLMEDNVSLEIYINKMRDK 960 
WD40-rpts                                                                                      

Query      961 DLYKWWGHYLESQSDMEAALHYYDLAQDYLSQVRVHCYLGSIQKASEIANETGNRAASYHVARQYEGQDEISQSVHFYTR 1040
WD40-rpts                                                                                      

Query     1041 AQAYNNAIRLCKENNLDDQLMNLALLSNPEDMMDTAMYYEEKGTHMDRAVMLYHKAGHVSKALELAFATEQFGALQLIAE 1120
WD40-rpts                                                                                      

Query     1121 DLNEASDPALLARCSDFFIKHAQYQKAVELLVAAKKYHEALQLCLDQSLTITEDLAESLTVPKDSTLLSEAGRKELLEKI 1200
WD40-rpts                                                                                      

Query     1201 ADCCMRQGNYHLATKKYTQAGNKIKAMRALLKSGDTEKIVFFAGVSRQKEIYVMAANYLQSLDWRNDAEIMKNIISFYTK 1280
WD40-rpts                                                                                      

Query     1281 GRALELLAGFYEACAEVEIDDYQNYEKAYGALTEACKCLTKAKGRSGEEADGKLLILTHRLGLIKRFIQARRMHEEDPVE 1360
WD40-rpts                                                                                      

Query     1361 AVRLCESLLEEKDLDLAVRVGDVYGFLVEHYCHHGNFTQAWSKIEELRSTHPKINLSMYVSQTSLEALQNAAGIRLVYKD 1440
WD40-rpts                                                                                      

Query     1441 TNTHAADDDEEVEED 1455
WD40-rpts                     

10 WD40-repeats found in QUERY=ENSDARP00000046545 (Len=1455):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-47       3.08  241.86  0.03374       12.5%     38.36
  WD 2:  Seg  4    51-89       4.83  314.33  0.00361       12.5%     53.36
  WD 3:  Seg  8    94-132      6.85  397.63  0.00027       30.0%     43.54
  WD 4:  Seg 11   139-178      5.64  347.54  0.00129       10.0%     42.69
  WD 5:  Seg 14   181-219      3.69  267.07  0.01557       15.0%     50.56
  WD 6:  Seg 18   220-259      5.76  352.67  0.00110       12.5%     54.60
  WD 7:  Seg 22   260-305      3.52  259.92  0.01940       25.0%     54.99
  WD 8:  Seg 27   316-353      4.98  320.47  0.00298       22.5%     45.10
  WD 9:  Seg 30   367-405      3.29  250.67  0.02576       10.0%     49.93
  WD10:  Seg 44   512-550      4.74  310.45  0.00407       22.5%     48.60

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-47     MAVYFD-------HRAEAPDSSGVPVLISWHSSVCVLAVGSVNPSTGGCVDLYL
   WD 2   51-89     -E---H-------VELCHVERGFSPSLLQWHPNKPLLAVG----WETGETILLS
   WD 3   94-132    -E---H-------TPLPNNTHTACITVLEWSSNGSRLVTG----DQAGVMAVWK
   WD 4  139-178    LQ---G-------SPLIKHDYSRPLTCCIFRPPPPAEDVA----MLARAAVSGD
   WD 5  181-219    -A---L-------DMFNWKKSSKGAAFALGSQEGLAFYIS----TADGSVYSVD
   WD 6  220-259    EQ---V-------KSVPLLSVESAVHKMWYSKRRSALAVV----TDSLQLSQFS
   WD 7  260-305    LG---PEGFAQEISKVKLSGRGGPNADVVWT-EGGLLITA----SGELHIRLWH
   WD 8  316-353    LD---E-------SL--GFEKGERLNCVSFCTSKQVLAAG----TSRGRVALWH
   WD 9  367-405    -Q---W-------KLQTPAEVEGNISQLQWGSSAHLLAVC----SSSSVVILSE
   WD10  512-550    -G---T-------VKQLLVFSEAEGNPTLLSVCGSYLAVG----TDTCHIRVFD

   WD40 Template    TG---E-------CLRTLSGHTSGVTSVSFSPDGKRLVSG----SEDGTIKVWD