Input parameters:

  Query = ENSDARP00000044785 (Len=369)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000044785, Len=369):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRYCSTRAGVQGRSFRDVLFSGYAADGGMFMPENLPSLSAETLRSWRRLSYRQLLCEVCELFIPEQEIPREQLEGLVSSA 80  
WD40-rpts                                                                                      

Query       81 LSSFSVPDAVRLVQLKDSLSILELFHGETLAFKDLAMSCTAHFLQYFLRRDRQRATILVGTSGDTGSSAIRSVLGLREVD 160 
WD40-rpts                                                        (_____________________________

Query      161 IVVVFPRGRITKIQELQMTTSVAENVHVFAADGTSDDIDVPLRKLFADADLVQRHRLMSLNSVNWSRIMVQTAHFLFAYL 240 
WD40-rpts      __________________________WD 1__________________________________________________

Query      241 QLTPSLPEGDTLPVLEVLVPTGGAGNITAGIIVKRMGVPLRLVAMVNANDIVHRTVQSGDFSMSSSVTQTLAPAIDIQDP 320 
WD40-rpts      ____)                                                                           

Query      321 YNMERVFWLLSGGDGLMVKSLMEEFQKTHKLSLPASLHQQMLYSDCISA 369 
WD40-rpts                                                       

1 WD40-repeats found in QUERY=ENSDARP00000044785 (Len=369):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4   131-245      2.84  231.92  0.04565       20.0%     16.28

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  131-245    DRQRATILVGTSGDTGSSAIRSVLGLREVDIVVVFPRGRITKIQELQMTTSVAENVHVFAADGTSDDIDVPLRKLFADADLVQRHRLMSLNSVNWSRIMVQTAHFLFAYLQLTPS

   WD40 Template    TGECLRTLSGHTSG--------------VTSVSFSPDGKRL-------------------VSGSE------------D------------GTIK------------------VWD