Input parameters:

  Query = ENSDARP00000044330 (Len=934)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000044330, Len=934):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MPLRLDIKRKLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRASKFVARKNWVITGADDMQ 80  
WD40-rpts         (_________________WD 1_________________)   (_________________WD 2____________

Query       81 IRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFAS 160 
WD40-rpts      ____)   (_________________WD 3________________)    (_________________WD 4_______

Query      161 ASLDRTIKVWQLGSSSPNFTLEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPE 240 
WD40-rpts      __________)(___________________WD 5___________________)   (_________________WD 6

Query      241 LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNSVALGYDEGSIIIKLGREEPAMSMDTNGKIIWAKHS 320 
WD40-rpts      ________________)   (_________________WD 7________________)(_________________WD 

Query      321 EIQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDS 400 
WD40-rpts      8_________________)  (_________________WD 9________________)                    

Query      401 SEYAIRESSSVVKIFKNFKEKKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA 480 
WD40-rpts                                                         (_________________WD10_______

Query      481 TEESFFILRYLSEKVAASQENNEGVTEDGIEDAFEVLGEIQEVVKTGLWVGDCFIYTSSVNRLNYFVGGEIVTIAHLDRT 560 
WD40-rpts      _________)(_________________WD11_________________)                              

Query      561 MYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTD 640 
WD40-rpts                                                                                      

Query      641 PEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVAKLAEGAE 720 
WD40-rpts                                                                                      

Query      721 RDGKNNVAFMTYFLQGKLDNCLELLIKTNRLPEAAFLARTYLPSQVSRVVKLWRESLSKVNQKAAESLADPTEYENLFPG 800 
WD40-rpts                                                                                      

Query      801 LREAFVAEQYLKETSLGQTRPASDYPLITPNEERNVLEEASGYEPKGILPAPTQLKQEVSEDEEVLASVSSVSAVSSAQS 880 
WD40-rpts                                                                                      

Query      881 QPDPKLQEKTEEKTPEITAAEQKVIDELEDDLDNMELDDIDTTDVNLDDDFLDD 934 
WD40-rpts                                                            

11 WD40-repeats found in QUERY=ENSDARP00000044330 (Len=934):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     4-43       6.05  364.63  0.00076       22.5%     55.58
  WD 2:  Seg  5    47-85       6.59  386.76  0.00038       17.5%     56.46
  WD 3:  Seg  9    89-127      7.94  442.59  6.7e-05       22.5%     55.77
  WD 4:  Seg 13   132-171      7.71  433.27  9.0e-05       37.5%     55.58
  WD 5:  Seg 17   172-215      8.00  445.14  6.2e-05       37.5%     51.29
  WD 6:  Seg 21   219-257      9.71  515.79  6.9e-06       40.0%     54.40
  WD 7:  Seg 25   261-299      4.50  300.57  0.00553       20.0%     53.70
  WD 8:  Seg 29   300-339      3.52  260.25  0.01920       12.5%     38.09
  WD 9:  Seg 33   342-380      3.58  262.62  0.01785       10.0%     50.06
  WD10:  Seg 44   452-490      3.11  243.31  0.03227       10.0%     38.65
  WD11:  Seg 48   491-530      5.34  335.41  0.00188       17.5%     30.22

Multiple sequence alignment of 11 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    4-43     RL--DIKRKLTARSDRVKSVDLHP-SEPW--MLASLYNGSVCVWN
   WD 2   47-85     -Q--TLVKTFEVCDLPVRASKFVA-RKNW--VITGADDMQIRVFN
   WD 3   89-127    -L--ERVHMFEAHSDYIRCIAVHP-TQPY--ILTSSDDMLIKLWD
   WD 4  132-171    -W--SCSQVFEGHTHYVMQIVINPKDNNQ--FASASLDRTIKVWQ
   WD 5  172-215    LGSSSPNFTLEGHDKGVNCIDYYS-GGDKPYLISGADDRLVKIWD
   WD 6  219-257    -K--TCVQTLEGHAQNVSCVNFHP-ELPI--IITGSEDGTVRIWH
   WD 7  261-299    -Y--RLESTLNYGMERVWCVSGLR-GSNS--VALGYDEGSIIIKL
   WD 8  300-339    GR--EEPAMSMDTNGKIIWAKHSE-IQQA--NLKAMGDAEIKDGE
   WD 9  342-380    -P--LAVKDMGSCEIYPQTIQHNP-NGRF--VVVCGDGEYIIYTA
   WD10  452-490    -W--ENTELIRRIEIQPKHIFWSD-SGEL--VCIATEESFFILRY
   WD11  491-530    LS--EKVAASQENNEGVTEDGIED-AFEV--LGEIQEVVKTGLWV

   WD40 Template    TG--ECLRTLSGHTSGVTSVSFSP-DGKR--LVSGSEDGTIKVWD