Input parameters:

  Query = ENSDARP00000038258 (Len=601)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000038258, Len=601):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKRVRTEQIQYAVTQYLKRRQYIDTDGSMKGAKLSQTAEEMAASLTVQTESSCANVVSAAPCQADPQQYENQYSRLRSFL 80  
WD40-rpts                                                                                      

Query       81 QEAEGPLVKEASSVLFPLFLYLHLHMARCGLKGALDSFYSRFHSLFQQDPEQKAIVDLLRGALTLQDVTTNPKLCALLDH 160 
WD40-rpts                                                                            (_________

Query      161 KYVVYLTDQAYSYLLRYLQSEDNSAICWVLTAHLQVEVTAAQRTDYQLYGAGVGTGNTSSSSSSTWASVDGSEGAERLEV 240 
WD40-rpts      ________WD 1________________)                                 (_________________

Query      241 PAGLPQNEAALENLQDCIKRVREGPPSLTTVCFYAFQHTEQLLNTAEVSADSRLLAAGFDNSAVKLWSLRARKLKAGPHR 320 
WD40-rpts      _WD 2_________________)      (_________________WD 3________________)(___________

Query      321 ADVSKIRLACDVLEEEADDEDASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVW 400 
WD40-rpts      _____WD 4________________)_______________WD 5________________)   (______________

Query      401 DVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTQQGASVRLFTGHR 480 
WD40-rpts      ___WD 6________________)   (_________________WD 7________________)   (__________

Query      481 GPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRNAHGSAPT 560 
WD40-rpts      _______WD 8________________)   (_________________WD 9________________)          

Query      561 DGCSSELIGQYTGSTSNILNVQFMACNLLLVTGTAMEKQEQ 601 
WD40-rpts          (________________WD10_______________)

10 WD40-repeats found in QUERY=ENSDARP00000038258 (Len=601):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   151-189      5.52  342.68  0.00150       20.0%     46.55
  WD 2:  Seg  9   223-263      4.86  315.54  0.00348       10.0%     21.11
  WD 3:  Seg 12   270-308      8.11  449.59  5.4e-05       17.5%     53.39
  WD 4:  Seg 16   309-346      5.32  334.62  0.00192       12.5%     40.68
  WD 5:  Seg 19   345-382      9.61  511.74  7.9e-06       37.5%     52.99
  WD 6:  Seg 23   386-424      8.53  466.94  3.2e-05       25.0%     53.87
  WD 7:  Seg 27   428-466      9.69  515.14  7.1e-06       35.0%     49.34
  WD 8:  Seg 31   470-508     10.51  548.71  2.5e-06       42.5%     54.53
  WD 9:  Seg 35   512-550     10.43  545.63  2.8e-06       42.5%     52.85
  WD10:  Seg 38   565-601      4.17  287.10  0.00839       22.5%     37.94

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  151-189    -NP-KLCALLDHKYVVYLTDQAYSYLLRYLQSEDNSAICWV
   WD 2  223-263    SSTWASVDGSEGAERLEVPAGLPQNEAALENLQDCIKRVRE
   WD 3  270-308    -TV-CFYAFQHTEQLLNTAEVSADSRLLAAGFDNSAVKLWS
   WD 4  309-346    LRA-RKLKAGPHRADVSKIRLACDV--LEEEADDEDASGSE
   WD 5  345-382    --S-EIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWD
   WD 6  386-424    -FT-NTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWS
   WD 7  428-466    -TY-PLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWS
   WD 8  470-508    -GA-SVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWD
   WD 9  512-550    -GG-LFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWD
   WD10  565-601    -SE-LIGQYTGSTSNILNVQFMACNLLLVTGTAMEKQE--Q

   WD40 Template    TGE-CLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD