Input parameters:

  Query = ENSDARP00000032185 (Len=1552)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000032185, Len=1552):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 VQVYLCSNPEDSVVERTLIRQKVFPRLREYCRSTYGLDFRVIDPYEATKPKNWPTQQERLRILEDCWNNSLHSFFVGLVG 80  
WD40-rpts                                                                                      

Query       81 EQYGDACLPEQVEASEFQLILQVCQRMGFKTDVLEKCYRRDENTIPPSFCMLEPSRRCKQTSVQQENPTEEKNWCKVFPE 160 
WD40-rpts                                                                                      

Query      161 VRRILHDVVNQCIQEGTLALEKAQKYFQSSLENDLRYAYEGRSSEDVARCICYVHKITVPMKENTIPPEKEDQLHRLSQL 240 
WD40-rpts                                                                                      

Query      241 RDQFLPSLVASHKAVVYCTTTKCNRLQCYTPEMRLDFGVGLCEQLNVDLKRLIDHTMLNKRTVAVDNFGEKDLCRIFSSL 320 
WD40-rpts                                                                                      

Query      321 YRIERKEVEHVKSYLEGKNTLFPFILNGGPYSGKTVLLAHCASQVSVWLKNLDPEILVFFIDVNSSLRQLLKYICERADS 400 
WD40-rpts                                                                                      

Query      401 SNTNINSIFQLKENFKRLLTVRSTSKNPLVIIIDGLDQLPKTDGQPDLTCLPKALAPNVKLLISVSANRHALLAALKQYY 480 
WD40-rpts                                                                                      

Query      481 PDSALFCELQQVDTKSCNQLLTTLLQGSNRKITSGQQVYVNEALKKCTVPLYVELLYRQAVCWHSEFEITEETLDLEVHN 560 
WD40-rpts                                                                                      

Query      561 SIVLIFDHMERKHGKSLVSKALSYLTLARYGMTTAELTDVLSCDDEVVESFLPQGEGVPATLRVPEVSVETLLSDLKGFL 640 
WD40-rpts                                                                                      

Query      641 VQRNILGTQTLSWVNRHFPLVVCKQYLCSEETCLKIHHVLSDYFSGSWANGTKKHFIINKDTQIQSSSDVPRNIYIDRQV 720 
WD40-rpts                                                                                      

Query      721 PSQPCIFSQPFYISTAMRTPTRPNLRKLHTLSFHLLKSGRIEELGSQMISQEYLQVMLHAMLADELFLWLEKTSQLIFPR 800 
WD40-rpts                                                                                      

Query      801 ELQLLHAILKSSACLLRNNPADLPIVLQAKLLPFLSVFPSLEECVNPARAEGLSLKCGMSTVLPSVPSVPYSQSTPQDSM 880 
WD40-rpts                                                                                      

Query      881 ASQIILSAGSLCGAVVVVLDNGAAWVCHGATCEGFKVTQSSNLKFTSVCSSGNTFLLSTCCGKLVLWDAVVKTQPLEIKI 960 
WD40-rpts                                  (_________________WD 1_________________)        (___

Query      961 QHTENHKNKILEGVLVLGDNLFVWWREQNIVNVFVDKEELTQLCCTYEITCVLCSGEGNIIYCGQNEGSVTIFDWPNGQL 1040
WD40-rpts      ______________WD 2________________)(_________________WD 3________________)   (__

Query     1041 LATLTCPKGMPLIEIILTEGDEVISCVDQAGNVFAWDLEMITEPVLICENHCGIQGKVLNTDYKGDSILLICKKQQIQLI 1120
WD40-rpts      _______________WD 4_________________)   (__________________WD 5_________________

Query     1121 DISQTDVLDQFNPPRGKTFKQAIIDQNSHFILALLCNCSFLLVWNCASGQCVLSLDTGNCQDINLLKCGTTYLAAIASVG 1200
WD40-rpts      )   (__________________WD 6_________________)(_________________WD 7_____________

Query     1201 VLIWDMDLIRTSALAPKSGKRVKIIITVGSQGGTCYSADGSKLVWKWAVSSGKVEGRFLHRGSVESMCISGDGNYLVSIA 1280
WD40-rpts      ____)(___________________WD 8__________________)(_________________WD 9__________

Query     1281 DGDVYVWETCNGENTYRISGSQAYKVLITPKGNFGVALSENSSSRVWKLQSGHSICSIHLHLRNANISPEGTFLLGVNSG 1360
WD40-rpts      _______)(_________________WD10_________________)   (________________WD11________

Query     1361 NLLAASLWSGNVNKCFSCSDQSDVVAFHSLLNHPDFVIVALSSGALYSWKLTEDTTCHQIQLPDSLFCQPEIFGLSSNGG 1440
WD40-rpts      ________)  (_________________WD12________________)      (_________________WD13__

Query     1441 YAVLSISECTINILNFSNSKLCSLRTEGPVLQTTVGVSGQYMVYACYSSLVCRNLSCDLHEKPMLVAIRLTDGGTIGRFY 1520
WD40-rpts      ______________)                                  (_________________WD14_________

Query     1521 LCKMPSVLTLSKDLIVYVGFEDGSVGVYAVHD 1552
WD40-rpts      ________)                       

14 WD40-repeats found in QUERY=ENSDARP00000032185 (Len=1552):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 17   909-948      8.22  454.13  4.7e-05       17.5%     55.62
  WD 2:  Seg 21   957-995      6.19  370.37  0.00063       10.0%     46.83
  WD 3:  Seg 24   996-1034     8.20  453.34  4.8e-05       22.5%     53.10
  WD 4:  Seg 28  1038-1077     6.35  376.96  0.00052       17.5%     54.68
  WD 5:  Seg 32  1081-1121     5.98  361.86  0.00083       12.5%     51.93
  WD 6:  Seg 36  1125-1165     5.62  346.77  0.00132       10.0%     49.97
  WD 7:  Seg 40  1166-1205     7.34  417.91  0.00015       15.0%     53.76
  WD 8:  Seg 44  1206-1248     4.94  318.73  0.00315       12.5%     48.05
  WD 9:  Seg 47  1249-1288     6.59  386.94  0.00038       32.5%     54.00
  WD10:  Seg 51  1289-1328     7.34  417.97  0.00014       27.5%     52.24
  WD11:  Seg 55  1332-1369     5.10  325.15  0.00258       17.5%     51.52
  WD12:  Seg 59  1372-1410     5.46  340.14  0.00162       12.5%     54.17
  WD13:  Seg 63  1417-1455     6.92  400.65  0.00025       12.5%     47.18
  WD14:  Seg 70  1490-1529     6.04  364.35  0.00076       10.0%     38.16

Multiple sequence alignment of 14 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  909-948    GAT-CEGFKVTQSSN---LK-FTSVCSS--GNT--FLLSTCCG--KLVLWD
   WD 2  957-995    -EI-KIQHTENHKNK---IL-EGVLVLG--DNL--FVWWREQN--IVNVFV
   WD 3  996-1034   -DK-EELTQLCCTYE---IT-CVLCSGE--GNI--IYCGQNEG--SVTIFD
   WD 4 1038-1077   -GQ-LLATLTCPKGM---PLIEIILTEG--DEV--ISCVDQAG--NVFAWD
   WD 5 1081-1121   -IT-EPVLICENHCG---IQ-GKVLNTDYKGDS--ILLICKKQ--QIQLID
   WD 6 1125-1165   -TD-VLDQFNPPRGK---TF-KQAIIDQ--NSHFILALLCNCS--FLLVWN
   WD 7 1166-1205   CAS-GQCVLSLDTGN---CQ-DINLLKC--GTT--YLAAIASV--GVLIWD
   WD 8 1206-1248   MDL-IRTSALAPKSGKRVKI-IITVGSQ--GGT--CYSADGSK--LVWKWA
   WD 9 1249-1288   VSSGKVEGRFLHRGS---VE-SMCISGD--GNY--LVSIA-DG--DVYVWE
   WD10 1289-1328   TCN-GENTYRISGSQ---AY-KVLITPK--GNF--GVALSENS--SSRVWK
   WD11 1332-1369   -GH-SICSIHLH------LR-NANISPE--GTF--LLGVNSGNLLAASLWS
   WD12 1372-1410   -VN-KCFSCSDQSDV---VA-FHSLLNH--PDF--VIVALSSG--ALYSWK
   WD13 1417-1455   -CH-QIQLPDSLFCQ---PE-IFGLSSN--GGY--AVLSISEC--TINILN
   WD14 1490-1529   LVC-RNLSCDLHEKP---ML-VAIRLTD--GGT--IGRFYLCK--MPSVLT

   WD40 Template    TGE-CLRTLSGHTSG---VT-SVSFSPD--GKR--LVSGSEDG--TIKVWD