Input parameters:

  Query = ENSDARP00000016256 (Len=446)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000016256, Len=446):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNFSEVFKQSNQLCKVSPDGKYLATCVQYRLVVRDIGTLQIVHLYTCLDQVMHMEWSSDSLFILCAMYKRGLVQVWSLEQ 80  
WD40-rpts      (_______________WD 1______________)(__________________WD 2__________________)   

Query       81 PDWHCKIDEGSIGLVSSRWSPDGRHILNTTEFNLRITVWSLCTKSVSYIKYPKACQKGMDFTADGRYMALAERRDCKDYI 160 
WD40-rpts      (_________________WD 3_________________)  (__________________WD 4_______________

Query      161 SVFVCDDWHLLRHFESETQDLAGLEWSPNGCVLAVWDNCLEYKILLYSLDGRLLSFYSAYEWSLGIKSVAWSPSSQFLAI 240 
WD40-rpts      ___)   (_________________WD 5________________)    (__________________WD 6_______

Query      241 GSYDEKVRILNHITWKKITEFEHPATITNSKAVVFKEVEKRPVVSEDLSIRQLTVDNALFSTQSKYEITQLPVQVPVVKP 320 
WD40-rpts      __________)   (_________________WD 7_________________)                          

Query      321 DPERANPKIGISAVAFSADNRYLATKNDNMPQSLWVWDMQKFSLLAVLEQTAPVRCFVWDPHLPRLALCTGNTKLYMWSP 400 
WD40-rpts      (_______________WD 8_______________)  (__________________WD 9_________________)(

Query      401 AGCISVTVPVEGFQVQSLFWHCTGSSLVLLSKDQLCLCYTDAEEQK 446 
WD40-rpts      __________________WD10_________________)      

10 WD40-repeats found in QUERY=ENSDARP00000016256 (Len=446):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-35       5.96  360.93  0.00085       20.0%     34.40
  WD 2:  Seg  4    36-77       6.54  384.90  0.00040       20.0%     55.57
  WD 3:  Seg  8    81-120      7.09  407.41  0.00020       25.0%     56.25
  WD 4:  Seg 12   123-164      6.14  368.35  0.00068       12.5%     56.10
  WD 5:  Seg 16   168-206      8.14  450.96  5.2e-05       20.0%     57.44
  WD 6:  Seg 20   211-251      7.91  441.57  7.0e-05       30.0%     57.41
  WD 7:  Seg 24   255-294      5.57  344.54  0.00141       12.5%     51.18
  WD 8:  Seg 30   321-356      6.71  391.75  0.00033       17.5%     40.98
  WD 9:  Seg 33   359-399      7.33  417.64  0.00015       17.5%     56.39
  WD10:  Seg 37   400-440      7.61  428.85  0.00010       22.5%     51.78

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-35     ------MN-FSEVF--KQSNQL-CKVSPDGKY-LATCVQY-RL---V-VRD
   WD 2   36-77     IGT-LQIV-HLYTC--LDQVMH-MEWSSDSLF-ILCAMYKRGL---VQVWS
   WD 3   81-120    -PD-W-HC-KIDEG--SIGLVS-SRWSPDGRHILNTTEFN-LR---ITVWS
   WD 4  123-164    -TK-S-VS-YIKYP--KACQKG-MDFTADGRY-MALAERR-DCKDYISVFV
   WD 5  168-206    -WH-L-LR-HFESE--TQDLAG-LEWSPNGCV-LAVWDNC-LE---YKILL
   WD 6  211-251    -GR-L-LS-FYSAYEWSLGIKS-VAWSPSSQF-LAIGSYD-EK---VRILN
   WD 7  255-294    -WK-K-IT-EFEHP--ATITNSKAVVFKEVEK-RPVVSED-LS---IRQLT
   WD 8  321-356    ------DP-ERANP--KIGISA-VAFSADNRY-LATKNDN-MP---QSLWV
   WD 9  359-399    MQKFS-LL-AVLEQ--TAPVRC-FVWDPHLPR-LALCTGN-TK---LYMWS
   WD10  400-440    PAG-C-ISVTVPVE--GFQVQS-LFWHCTGSS-LVLLSKD-QL---CLCYT

   WD40 Template    TGE-C-LR-TLSGH--TSGVTS-VSFSPDGKR-LVSGSED-GT---IKVWD