Input parameters:

  Query = ENSDARP00000009095 (Len=217)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000009095, Len=217):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MELVFKQSKSVAVTSMSFPLGDVNNFVVGSEDGSVYTASRHGSRAGISEMFEGHHGPITGIHCHTAAGPVDFSHLFLTAS 80  
WD40-rpts      (_________________WD 1________________)     (____________________WD 2___________

Query       81 FDWTVKLWSNKNNKPLYSFEDNSDYVYDVMWSPVHPALFACVDGLGRVDLWNLNNDTEVPTASVAVDGSPALNRLRWSQS 160 
WD40-rpts      ________)   (_________________WD 3_________________)(____________________WD 4___

Query      161 GREIAVGDSEGQIHIYDVGEQIAVPRNDEWTRFVRTLVEINENRDDAEELAAQRLAA 217 
WD40-rpts      ________________)                                        

4 WD40-repeats found in QUERY=ENSDARP00000009095 (Len=217):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-39       5.81  354.86  0.00103       32.5%     46.68
  WD 2:  Seg  5    45-89       6.10  366.84  0.00071       20.0%     44.34
  WD 3:  Seg  8    93-132      5.82  354.96  0.00102       20.0%     52.08
  WD 4:  Seg 12   133-177      6.57  386.03  0.00039       15.0%     57.37

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-39     --M-----ELVFKQSKSVAVTSMSFPLGD------VNNF-VVGSEDGSVYTAS
   WD 2   45-89     -AG-----ISEMFEGHHGPITGIHCHT-AAGPVDFSHLF-LTASFDWTVKLWS
   WD 3   93-132    -NK-----PLYSFEDNSDYVYDVMWSP-V------HPALFACVDGLGRVDLWN
   WD 4  133-177    LNNDTEVPTASVAVDGSPALNRLRWSQ-S------GREI-AVGDSEGQIHIYD

   WD40 Template    TGE-----CLRTLSGHTSGVTSVSFSP-D------GKRL-VSGSEDGTIKVWD