Input parameters:

  Query = ENSDARP00000003663 (Len=586)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSDARP00000003663, Len=586):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAADGGALKDINEIKSQFRTREGFYKLLTLSDSQQRAGLPRGPTGVTAVRVSMVKLKPEDPSEESERVCFNIGRELYFYT 80  
WD40-rpts                                                             (______________WD 1______

Query       81 YSGILHMCSLSLSIEEKFFRSHTLLRITAEKKLVIHLNTCNQCASLCFTAKSVTSQVFSQRLIDKSKVTCLKWLPKSENL 160 
WD40-rpts      ________)                                             (_________________WD 2____

Query      161 FLASHASGHLYLYNVEHPCGTTAPQYCLLRQGEGFSVYSCKTKTPRNPLLRWVVGEGGLNEFAFSPDGVHVACVGQDGCL 240 
WD40-rpts      _____________)(___________WD 3___________)   (_________________WD 4_____________

Query      241 RVFHFDSMELQGVMKSYFGGLLCVSWSPDGKYLATGGEDDLVTVWSFSESRVVARGHGHKSWVNVVAFDPFTTNLEDEEP 320 
WD40-rpts      ___)   (_________________WD 5________________)   (______________________WD 6____

Query      321 MELSGSDEDLQQGALHFGRVRTSSTLSRLSRHSSKGGAASVSYRFGSVGQDTQFCLWDLTDDVLYPRLPLSRALTNTFGP 400 
WD40-rpts      __________________)   (_______________WD 7_______________)(_________________WD 8

Query      401 TVATSNSGSVVEGHHHPSIQTASTLPLPLPRSLSRSNSLPHPAVANTSKSQGAPESTGTVSSSGTVTPFSIGRFATLSLQ 480 
WD40-rpts      _________________)             (_________________WD 9________________)          

Query      481 ERKSDKSGVGGEKEHKRYHSLGNISKSNDKINVAPRSSRLDGAKVLGTTLCPRMNEVPLLEPLVCKKIAHERLTVLVFMN 560 
WD40-rpts                                                                 (________________WD10

Query      561 DCIITACQEGLICTWARPGKTVSPSY 586 
WD40-rpts      _______________)          

10 WD40-repeats found in QUERY=ENSDARP00000003663 (Len=586):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4    56-89       4.26  290.82  0.00748       10.0%     29.01
  WD 2:  Seg 10   135-174      5.93  359.75  0.00088       15.0%     47.26
  WD 3:  Seg 14   175-202      2.94  236.09  0.04022        7.5%      9.24
  WD 4:  Seg 16   206-244      8.82  479.15  2.2e-05       25.0%     54.41
  WD 5:  Seg 20   248-286      9.91  523.86  5.4e-06       37.5%     55.94
  WD 6:  Seg 24   290-339      5.94  359.83  0.00088       30.0%     33.34
  WD 7:  Seg 27   343-378      6.59  386.90  0.00038       27.5%     43.29
  WD 8:  Seg 31   379-418      6.14  368.17  0.00068       15.0%     27.81
  WD 9:  Seg 34   432-470      6.39  378.61  0.00049       10.0%     23.10
  WD10:  Seg 40   540-576      5.91  358.61  0.00091       20.0%     44.91

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   56-89     ------LKPEDPSEESERVCFNIGREL-------YFYTYS----GILHMCS
   WD 2  135-174    -SQVFSQRLIDKSKVTCLKWLPKSENL------FLASHAS----GHLYLYN
   WD 3  175-202    ------------VEHPCGTTAPQYCLL-------RQGEGF----SVYSCKT
   WD 4  206-244    -RNPLLRWVVGEGGLNEFAFSPDGVHV-------ACVGQD----GCLRVFH
   WD 5  248-286    -MELQGVMKSYFGGLLCVSWSPDGKYL-------ATGGED----DLVTVWS
   WD 6  290-339    -SRVVARGHGHKSWVNVVAFDPFTTNLEDEEPMELSGSDEDLQQGALHFGR
   WD 7  343-378    -SSTLSRLSRHSSKGGAASVSYR---F-------GSVGQD----TQFCLWD
   WD 8  379-418    LTDDVLYPRLPLSRALTNTFGPTVATS-------NSGSVV----EGHHHPS
   WD 9  432-470    -SLSRSNSLPHPAVANTSKSQGAPEST-------GTVSSS----GTVTPFS
   WD10  540-576    -LEPLVCKKIAHERLTVLVFMNDC--I-------ITACQE----GLICTWA

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRL-------VSGSED----GTIKVWD