Input parameters:

  Query = EG_PFL1070c (Len=821)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PFL1070c, Len=821):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKLNNIYSFFFLFFVLCVIQENVRRVLCDSSVEGDKGPSDDVSDSSGEKKEVKRDRDTLEEIEEGEKPTESMESHQYQTE 80  
WD40-rpts                                                                                      

Query       81 VTRLMDIIVNSLYTQKEVFLRELISNAADALEKIRFLSLSDESVLGEEKKLEIRISANKEKNILSITDTGIGMTKVDLIN 160 
WD40-rpts                                                                                      

Query      161 NLGTIAKSGTSNFLEAISKSGGDMSLIGQFGVGFYSAFLVADKVIVYTKNNDDEQYIWESTADAKFTIYKDPRGATLKRG 240 
WD40-rpts                         (_________________WD 1_________________)                     

Query      241 TRISLHLKEDATNLLNDKKLMDLISKYSQFIQFPIYLLHENVYTEEVLADIAKDMVNDPNYDSVKVEETDDPNKKTRTVE 320 
WD40-rpts                                                                                      

Query      321 KKVKKWTLMNEQRPIWLRSPKELKDEDYKQFFSVLSGYNDQPLYHIHFFAEGEIEFKCLIYIPSKAPSMNDQLYSKQNSL 400 
WD40-rpts                                                                                      

Query      401 KLYVRRVLVADEFVEFLPRYMSFVKGVVDSDDLPLNVSREQLQQNKILKAVSKRIVRKILDTFHKLYKEGKKNKETLRSE 480 
WD40-rpts                                                                                      

Query      481 LENETDEEKKKEITKKLSEPSTYKLIYKEYRKFLKSGCYEDDINRNKIAKLLLFKTMQYPKSISLDTYIEHMKPDQKFIY 560 
WD40-rpts                                                                                      

Query      561 YASGDSYEYLAKIPQLQIFKKKNIDVLFLTESVDESCIQRVQEYEGKKFKSIQKGEISFELTEEEKKKEQQMQKMYKALI 640 
WD40-rpts                                                                                      

Query      641 DVISDTLKNQIFKVEISRRLVDAPCAVVSTEWGLSGQMEKLMKMNVSNSDQIKAMSGQKILEINPNHPIMIDLLKRSVTN 720 
WD40-rpts                                                                                      

Query      721 PKDLELTNSIKIMYQSAKLASGFDLEDTADLAQIVYDHINQKLGVDNNLKIDDLDPSIFETKKIEDENDSSKFEEEINID 800 
WD40-rpts                                                                                      

Query      801 DEIQKKDNNVDNESNDKSDEL 821 
WD40-rpts                           

1 WD40-repeats found in QUERY=EG_PFL1070c (Len=821):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3   180-219      2.85  232.21  0.04525       15.0%     24.92

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  180-219    SGGDMSLIGQFGVGFYSAFLVADKVIVYTKNNDDEQYIWE

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD