Input parameters:

  Query = EG_PFL1065c (Len=518)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PFL1065c, Len=518):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MERNLLNKDFSVKKKYQSYNYNIYKNNNYEIAPKKLYHLLIRLGITFLTIFIVSIFIKHNKFNEKNNLFLMVTSPDVLEL 80  
WD40-rpts                                                                                      

Query       81 FNCLGFPSNSKEIVYGKLENWGFNLSDIGDIEINKNYKDEDLSTYKYSINTYKNILLSSFEINKVNSLIDKNNLLYMYLE 160 
WD40-rpts                                                                                      

Query      161 ILKKKEIRTFYEFLNTFMILQDLNCLPVNYKGIYINGNLFIPKNEYDIFKSDINIIKEKNAKTLIEEEPYLYLTYHGGKK 240 
WD40-rpts                                                                                      

Query      241 KNAIHNICKFSRDGYFLGSVLLPFEENGIFFNSISLRGLLLYQNKLYIADSFKDNSKILMFSDSISNLSNRREYLSTFIT 320 
WD40-rpts                                                                                      

Query      321 QNYETNPLMIHPYGIKKYNDYFYVSSQNTGTVLRFNVENGQLGEPIDLYKNTSQGLVIKFNNNDEIRGLDFDSTGKCFVS 400 
WD40-rpts                                                                                      

Query      401 NKQVGVQIYDTNFKLIKILPVFSPISILFNSTNNHILVGSSTTHDIKEYDVNNFELIKVIKHPLLKHVAGINIYEDSLFV 480 
WD40-rpts                (_________________WD 1_________________)                              

Query      481 VSQKKNKLLEFSLSSSLLKSITIDGFSDIGERVILSPT 518 
WD40-rpts                                            

1 WD40-repeats found in QUERY=EG_PFL1065c (Len=518):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 21   411-450      3.62  264.01  0.01710       25.0%     36.82

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  411-450    TNFKLIKILPVFSPISILFNSTNNHILVGSSTTHDIKEYD

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD