Input parameters:

  Query = EG_PFL0370w (Len=395)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PFL0370w, Len=395):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSDYFTILSNIFTSTSLKKKYSSRLSTKSKKNQKRVKLIRLRNGHFRRIVDISNIDEKSIFPRSCTFASISSASKENERK 80  
WD40-rpts                                                                                      

Query       81 NSSEDTKEPQENLYGKSNTSSSITIKINFDESDENKSDQDNHSIDTISDISFTQTSRKSLEIESNTYESYREVEKEDIEE 160 
WD40-rpts                                                                                      

Query      161 EEEEEKEEEYEEEEEEEEYEEEEEEEEEEYEEEGLKTEEEKEEDNKEVEPEEELKEEDDKEVEPEEEKENEQKKEEQEEN 240 
WD40-rpts                                                                                      

Query      241 NLEAPSKTLMKGVKTNIYFLSTKERIEALMCYNYISNAIIFEKGKFLRYIFMNNVNNIIVNEHMINMLCKKEKIKYILSS 320 
WD40-rpts                                                (________________________WD 1_________

Query      321 NSIIIESNDFIKPLIIEFDSNISKKIFVKHLKMVDSFKLDDKLYREYLNDLSEHERDRLKHVESFYSNAIKVHNT 395 
WD40-rpts      _______________)                                                           

1 WD40-repeats found in QUERY=EG_PFL0370w (Len=395):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  8   283-336      2.80  230.20  0.04809       12.5%     30.50

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  283-336    KGKFLRYIFMNNVNNIIVNEHMINMLCKKEKIKYILSSNSIIIESNDFIKPLII

   WD40 Template    TGECLRTLSGHTSG--------------VTSVSFSPDGKRLVSGSEDGTIKVWD