Input parameters:

  Query = EG_PFE1515w (Len=1446)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PFE1515w, Len=1446):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MIKEKLLKFLNYYYFFKKYYIYHILFLYIFFLRITYTYAEITISQFYTFLLSKYENVENSRREDNFFYYFTHFFNFNSRC 80  
WD40-rpts                                                                                      

Query       81 DDKFLNTKLFVVVYLPICLKCFYTLFFDYVAYYIYIRYYFNKINNDFRNFFFSSLSYENIQVSNNSVCKNALHIVKKVRS 160 
WD40-rpts                                                                                      

Query      161 NSINKLKKEKKGIKKKNEVMNNYMRNRFSHMSFEEYKKYCSFLKRTHKKKKKKKKGNSFFYINGKKKLSSFGTTDYRKSV 240 
WD40-rpts                                                                                      

Query      241 YNKYKNKKRRKYNDNTFNNITYDTSSNEYNNNFIRKNVSLDEVKMKIMKYDEEFIKNNRLLCEKDQGHDGGNGLFNNLFK 320 
WD40-rpts                                                                                      

Query      321 NRKHIFFRRKNKNKIMDKNNNNNKYNNNNNNNMKNVNNWDEVIFSKFLKEKFKMIKKKNDINSINEDTNRNEYFLENNIN 400 
WD40-rpts                                                                                      

Query      401 KERIKNNSMNSWGILNYLFFKKSNDSNISYEALPDDTSNDNQHYNKIHKNVNNIYNTTFNQCYNKEYNNSSVLCSKDYDE 480 
WD40-rpts                                                                                      

Query      481 IYKNNKRSDDEKEKLLNFRLDKNNGKNQKKSENTDNMVNVKGVSTKNYFINFYNNLQNDNFLMNEENEFDVYTKGDISKE 560 
WD40-rpts                                                                                      

Query      561 QINVHNKSYNEDINEQKKMSKNGKKSKKGKTSVLDTNVDIDGNGYNDGTIILKENTDDNNNDNNDDGNNSDNNNDNNNNN 640 
WD40-rpts                                                                                      

Query      641 NNNISYDYNNYGNRNNFDMSYLKSNIVNNYIKGEKKNYLKKKNNPDNINECNNYDYNEISEDLNESQKMCYRSLRGSLHM 720 
WD40-rpts                                                                                      

Query      721 EYIFKDSYELLDNNEYNEYYYYNKFKSFYYEIDEENQTCSNIKEIISNKINAEFYHLKLNILILSCIIIQIFNSFILILI 800 
WD40-rpts                                                                                      

Query      801 SNNFILKRERIFFFCFLYSLLESVTDVISDNIFFLCGKFTNIYKKEFSINSIYIIQVISKMVLSVSTIFIYFIYHIFVIL 880 
WD40-rpts                                 (____________________WD 1___________________)        

Query      881 FNEVNIMIINTLIKALSIFVLSFIFLKNKDNIFSYYYNDKYVHLNNFFQKRNGEVGKLDGRRLAALMRRELNDPMVKRGL 960 
WD40-rpts                                                                                      

Query      961 YVSRGNNIISGFQQNEEVKSEMLNSDNNKVGAQKDVEQNNRCDVNLNVNYSNGNNNNNKKIIPSNTSDLSFKDIYKYDAY 1040
WD40-rpts                                                                                      

Query     1041 IKDAYVKNEKLNYSAMSKGDINNTYIKDEDLLNSTFGKGEYNKKIRKNGYNIFFMDKLKCVLEVLNIFKFISRIKSYLCK 1120
WD40-rpts                                                                                      

Query     1121 RNRMPYDFNYTLLNVKSVKYDESKIYDNGKYGKGKKKRKKSKLYKKYGKNENLNFEIKIPTIKNIKDLFCVNNKFDWSCS 1200
WD40-rpts                                                                                      

Query     1201 IPNNDMIKNCKMPLLNDNINMNNTWINNNNNNNIKKKNNINKKKKIIINYPLKLLLNNLNFSNIFYICLLLIIPTFERIF 1280
WD40-rpts                                                                                      

Query     1281 LNYKIKNITLDLHSYCYLNIVNYITDLIGLYIYISYFNEESYTSSIFLSSLFNIFLLSLRFLFLYKKFNQLGLLFLETIL 1360
WD40-rpts                                                                                      

Query     1361 KSLHKTFFYMPIFILVTKVYIKNINNLMCSFYSSILDVSSFASYYFEYLILSFYNIDDSKNIFIFVYLTFLILHLLSLIV 1440
WD40-rpts                                                                                      

Query     1441 ISKLKK 1446
WD40-rpts            

1 WD40-repeats found in QUERY=EG_PFE1515w (Len=1446):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 22   828-872      2.88  233.74  0.04320       15.0%     34.08

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  828-872    ISDNIFFLCGKFTNIYKKEFSINSIYIIQVISKMVLSVSTIFIYF

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSE-----DGTIKVWD