Input parameters:

  Query = EG_PFC0330w (Len=699)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PFC0330w, Len=699):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MYLLMSKFLVWIIIFGNFFVVHFFLCFKIPNNKITNVLTYDNSKKQRINSKHNTFLYKNDTLNKLLNRKKNKHTLFYRSK 80  
WD40-rpts                                                                                      

Query       81 KEKDIQESGYLYPFDHLEKKKTKFPPDPYIPSEDEKESSIDIFHDKINDDDLMIYEDDDDAKKYFGKTTFNKPNIIQKDE 160 
WD40-rpts                                                                                      

Query      161 NSEDDQDDDLNDQNDDPINNPTNNLTDNPTNNSTDNPTNNSIDNPTNNSIDNPTNNSIDNPTNNSIDNPTNNSIDNPTNN 240 
WD40-rpts                                                                                      

Query      241 SIDNPTNNSTDNPINSPNYQQVTQSNIILEEENNTNKTDIEKDIININFYSSEEKKIACEMIKDQIYYLLHSSMDKTFIE 320 
WD40-rpts                                                                                      

Query      321 TFNINIESHIVPSEKRICVSYNMKSHTFKRSISNLSDLIEFSNKLKYVLDERIHKLYYEDKNNENAYLNKTLRKELEIGK 400 
WD40-rpts                                                                                      

Query      401 KERDVTNLSKKNLQMSIESSLKLIEKCMQNMYKQNYEITLHDLKLAYNMLPCKYYGFFLSNLCSTISTLSYYVNDLQGTF 480 
WD40-rpts                                                                                      

Query      481 NFALKSIKYEPKYNVAWKCLGDAYRSFRKFWQAKNFYDIAIYLGYKDEKGERFEDIVQELNNLTENALKNVDLLKEHMNN 560 
WD40-rpts                                                                                      

Query      561 STNIIIKKNIGIVLNKNPDSIGGCYVSYIIEGSKASKKNLHHGDQIVALNNHVTYGKPIDFCLKAFQKNDGTYDIIFFKG 640 
WD40-rpts                                     (______________________WD 1______________________

Query      641 NIIELYGLKAYKYLMKNDLFYALFENEQIVSFKRNETILFDMKGFGTFSEYGMSKAEFV 699 
WD40-rpts      )                                                          

1 WD40-repeats found in QUERY=EG_PFC0330w (Len=699):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   592-641      2.99  238.06  0.03787        7.5%      6.31

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  592-641    GSKASKKNLHHGDQIVALNNHVTYGKPIDFCLKAFQKNDGTYDIIFFKGN

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRL----------VSGSEDGTIKVWD