Input parameters:

  Query = EG_PFB0755w (Len=1643)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PFB0755w, Len=1643):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MENSIPYNLYIKKRNIFSLEENHNLNLNSLKNNDTYQVKLRHKYVHGYLSEKNNILKFLQNKFIYPIKNLIVIYDLINRD 80  
WD40-rpts                                                                                  (___

Query       81 QFIFSHHTNQVFLIRCREKNRTVVSAEEEKRKIKIFVWNKLTLEILSEIKIKKENFIDIDYLNDKNIILLCKYNDKLILC 160 
WD40-rpts      ________________WD 1__________________)                                         

Query      161 IISLIYKNKEIRLNKKCVSVIKSLNDFYIHVKTEKTKGKDHEDEYFGKCKTGFLIEKNDLSKEKGSIYCIKNIKNINKRY 240 
WD40-rpts                                                                                      

Query      241 VKQNRMIYSRLNEIMKKKKKKRRRKKKLVTNIPLCNNNFSYCKENQERFILIDTLKKKKLFKKSILKKIKNQKDLMNMIH 320 
WD40-rpts                                                                                      

Query      321 IKSKKHQLINFSSYYIKFIKPLFNKNKYYNKSLYKNMKIVVDINENVCIYNDHYIFVYIIKDYNIYERLKYKNFKCSLFS 400 
WD40-rpts                                                                                      

Query      401 SDHMFYLRKENFYFFYTFYFELFINSYLYNRYVCLKKYNDKCKIKKNEENYEQADEDEEKKFVHYKIGGNYFINDEADHM 480 
WD40-rpts                                                                                      

Query      481 KKTKILIDSNEYNKNYVNIFNSTFVYKNYMDVECTNTFLHNNNNNKYDNNCNNNNKYDNNCNNNNKYDNNCNNNKYDYYY 560 
WD40-rpts                                                                                      

Query      561 SSEQYYKFPPLVNIQINVVEIFNFVCTENSDDINVIFKIKDEYGKKRRAHTNRINTEQQKKRDSNKIIKRRNNRNHQINT 640 
WD40-rpts                                                                                      

Query      641 PNQLSNNMIIKKKKKKKKNLIMKKYLVIGTKNGMIIINDFLKPHKIIHLEKICNEPIVSIFIFQNDMLILNRSGIIFFMD 720 
WD40-rpts                                                                                      

Query      721 IHNFVIYRDIDIFFSLEHKTKNLSYENCNNNIKRNCTYNSEETTQFINGKKICNGKKMCDGKKIRDDDETFEDSTNLAYH 800 
WD40-rpts                                                                                      

Query      801 HSNNLPCDTFEGKRIVNRMCNKKYNYDYKESYRTLKKRYINSFCHLNMYTILIGTTYNEIIIYNLLCDELCYIYDKNNKK 880 
WD40-rpts                                                                                      

Query      881 ISSYNIHNNNIIYSIENCLYKMNLKNYDTIKLLCLPTIYISSFVFYSDNLLICGSFKGNLYFIDICNNNNIKIINRIRKE 960 
WD40-rpts                                                                                      

Query      961 DFVGKQRMRIHKEKEILFVFKKKIINNKYIINKTKSDNSVKIYNEQDMKKNNKIISIHLNKHKNILICSFTYCIYIYKLN 1040
WD40-rpts                                                                                      

Query     1041 ISGNEKIDLRCISYLSIKNIIHIHVIKNMDNLFYITTRDDENISSYNYYLCSMNPCKIKTNKMEPLYFNILFENTWFYEF 1120
WD40-rpts                                                                                      

Query     1121 FYYNHKDDNQFLFVENNWNDERKNKSLILLDDSIFIIYTYCINKSRQSFEDTYYKQNNLMNVNNTSHVIKRNEYIGGKQK 1200
WD40-rpts                                                                                      

Query     1201 IYKNNKNNESTVNTSCDDYLGSTNQVKNTFPFNHNNNNKKKNKEKKTNIIHGKRNEQMDNSFNKFLSLIHTNNNSKAHVS 1280
WD40-rpts                                                                                      

Query     1281 NKSKKYDKIKIVKHIPQVVKSFKRRTNMCKMDNRKKDISLLSIIKNKEEKKKIHDIHINGESYNVVSKGVSIPVMLKNKL 1360
WD40-rpts                                                                                      

Query     1361 LNVRYEKEHLKKKNEEKEDCSKDEFLKKMKIIKKKKNNNNNNKINNHYVTYKLLKSMLKRKKNIYLCESKKLNCKHDDDI 1440
WD40-rpts                                                                                      

Query     1441 IKKDTSFIRRGINNESYIRDDIYLGINEKNEIQRKNFKPNIEVNKEIIEIEQFCNRGGDLCVINNGEINNLSYCINKETK 1520
WD40-rpts                                                                                      

Query     1521 LRTKGLGYIQNYLKKYMNTDIKMKGEFRDNINRSSNSIKHINSNLYKISPQNSDTTNYMGEKDKFINSYHVNNYVHSMMI 1600
WD40-rpts                                                                                      

Query     1601 RLPQRESVTYIEKKKKNKIDITKYNAYTKLIKKGEGDKKKNLI 1643
WD40-rpts                                                 

1 WD40-repeats found in QUERY=EG_PFB0755w (Len=1643):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5    77-119      3.50  259.04  0.01993       22.5%     23.25

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   77-119    INRDQFIFSHHTNQVFLIRCREKNRTVVSAEEEKRKI--KIFVWN

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVS-----GSEDGTIKVWD