Input parameters:

  Query = EG_PF14_0538 (Len=2391)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PF14_0538, Len=2391):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDNNKMFLRRSSRLSHNFDENNRNRELIEKREGGNMVKKQITHERRKSIYKDKDESLLSTDENSSTYDSDYTVSVNDDDS 80  
WD40-rpts                                                                                      

Query       81 SVGNKRKYNKENENNKNNNNNNNNRHNRRNKNKHNNNNNNNSSGDNSNAITPFYDGDKNKDNECIENVRTRKNNNYEKNN 160 
WD40-rpts                                                                                      

Query      161 LKNNSYIDILNEDIDDEDFDIFKRSKMDRSKRISTSYKNTQYNDINLRKRKSVYVESSNSEDSNKSDDDDEEYINEESSR 240 
WD40-rpts                                                                                      

Query      241 NNKKKKLKQTYSSSTFKNKKNFVNKKVYKNFEDFNLYENIKKNPKNLHDIIEEIYYSLFNKDTNEKVKISTFFLNFLAEC 320 
WD40-rpts                                                                                      

Query      321 SGNETLTWTVDIIDYIDKQIYLYEDIPNNNQLQNVIIGNTINNTTLSDIMTPSTVRSSNKITNMDEIIRDENNFEKVCTF 400 
WD40-rpts                                                                                      

Query      401 KCEKLEQYLSTDLNTDVLIKIKNENNKSYKAFANFFADFSFHFDENYIYDILYICIWIFSLSVSKYRKIRFTSSLASLSI 480 
WD40-rpts                                                                                      

Query      481 LLGLCKKIRYINNHERQSRKQLMAEYTRERKNINNLTGAGRKRNSSTTITRTSNTIHNNNNKNNSNNSTLDIINDDRSLN 560 
WD40-rpts                                                                                      

Query      561 IEDLINYKNKKDTELYNIVERNLIISQLIDNINEDRKNLTILNNFLLCTYNILYKNKIKDIFIDIRIITLEYFYLYLDVL 640 
WD40-rpts                                                                                      

Query      641 TLYFTNRKFTKLLIWILYDKDNKIKICCLKILIYLCNYYNNSNKKIFKIVELLYMSKKKLLNLIFDSDYNVRIKTFELIL 720 
WD40-rpts                                                                                      

Query      721 EMNKMKLNRTEFLHFKKTLKNKKNSAHNKKDDPHINDNTSSSEYEEDTDVNSTESEKIQNKKSIVLYNHNKRNKKNIGNK 800 
WD40-rpts                                                                                      

Query      801 QNHDGKEDDIYVISDNMCILSTKEKKIVSNLIWFNNNNKISQMITSLIYESQIKNKIKNYEKRKHNYFDVEHNDTNSEIV 880 
WD40-rpts                                                                                      

Query      881 KYNIIYLTKYLNKNIPTVKNFVHYFDYMKNYNENLKLYTVIDKFISGIREKLDCINNIDIIIELLCEDDISLSYIGKKKG 960 
WD40-rpts                                                                                      

Query      961 SDKTNDKEKDMGEDENNVQLSQRFNNNDNNVIDGERVIDGEHVIDGERVTENNTETRKHSTYLSHDCDKNNSDKSRDLRK 1040
WD40-rpts                                                                                      

Query     1041 CLLYICESSYRNLQNDINEMEKNKNRKGTSASTNSNNINNINNNVNINGVLLSDKNTAHSKLNNDTNKIKKMIIYTFYII 1120
WD40-rpts                                                                                      

Query     1121 KNSKQLIKLHQTNQEHLLLVFKILKIALYECKHIYKHEEKNNIYNFSSTIMEYFKNDIESNMNYFFNNIYIYLKETYEYL 1200
WD40-rpts                                                                                      

Query     1201 FYLLKNYKLPYYSSKYTMNIISIFLSLNDSLKGSNKLSSDLFFDLYYTYFNNFLENFLYYQKNYNMEVDRNEEDNKGEDE 1280
WD40-rpts           (______________________________WD 1______________________________)         

Query     1281 SDTHDEHGEDNVYLLNKKRKIILISENLVNKDKNIIEAIEEEIILNLTNLIHIYTLGFNYINNDLSNYKDIKNDILKKKK 1360
WD40-rpts                                                                                      

Query     1361 NIEKSIKMLCEQDYFSIKVKEKCQSFFFKDNIINLNEFLEENLLTSYYDENDIESYTHENNIQSDQYSEDVEMSYDDNDE 1440
WD40-rpts                                                                                      

Query     1441 DINYIGKKKNKNNKQKDKNKHNNINNINKRKTMNIQDILHLNDNMTKNNKNSSYIQSEEENFQYEQNLHNLYYSSDACIH 1520
WD40-rpts                                                                                      

Query     1521 ANVIIHLCLYIIKAKVNSIYYYDEDVVLHTPSSRLLLLCIDQIYIIYENYIYHLCKKRYFFNFLYNIFLHKYKNDKIDGK 1600
WD40-rpts                                                                                      

Query     1601 KNEWEKKNEGEKKNRNNQHNLNDNESNLENNIQNNNIKIEINENDKSEKNNNIDDNKNKNNKENDSNNINLEDLKKLHNL 1680
WD40-rpts                                                                                      

Query     1681 NNKKIDALKNIFIELNYIYANISTLRKDINHVLIFLIRSCNNTILRYGTFLNLMNIAQLENILLYSIEDLNKYKTLELFL 1760
WD40-rpts                                                                                      

Query     1761 NKIKNNDEIGSCMDIHIKEDMENYLDKDEEINKYKNVSRYIYKDDNILFNFVTELFKYVENMNNNNYNFVNSFLSIDISV 1840
WD40-rpts                                                                                      

Query     1841 FFPINTYTYIADMCKIYNKDVLSKNEKILEMQYMHMTLIIAQFILNCNNINIFNSCLGVLLLIHLNVKNKGLSSIALNFH 1920
WD40-rpts                                                                                      

Query     1921 NKLKKYNIDVFYEVLLCALIGLYTAYINNALEEKDLLLFSASIASRLGVKIVEKQKLPLCKFIHSCVSCALNLKNQNSFL 2000
WD40-rpts                                                                                      

Query     2001 KYILPYAQKLSLSEYQLNYLKKQILNLIDSYNVANQSHIKYENSIFEHMMLIICKKRKLNDEFKDINYENSYMNLNESIH 2080
WD40-rpts                                                                                      

Query     2081 MNISKNIINRNRQSEASTIIKTRKSVLQMNRNKDNDQVDKMNDDENKDEDNDGNNNNDSYNNDIQNDDLSDENNNIDKKK 2160
WD40-rpts                                                                                      

Query     2161 SSNDEDNINSESDINENNYVNQNMRHYRIKKELIHHENEHAEKEQTNNIHKAKDKYKRINKQNYGNEKNNSNNNEIYSEL 2240
WD40-rpts                                                                                      

Query     2241 DEKSHSNSTLSDLVSLNDEDNNNNNNDKGKSHYDMNSSPKPVRSKKYNNMHVIPKYNSELNMNDTDNKSMDINSKHSVDI 2320
WD40-rpts                                                                                      

Query     2321 SLNSSLGNISYKDDDNMSLISDVKGKNKYFTQNADDSNSDIVPGMSPIKKNDGKRSELSTPISYADDLMNF 2391
WD40-rpts                                                                             

1 WD40-repeats found in QUERY=EG_PF14_0538 (Len=2391):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 25  1206-1271     3.04  240.43  0.03524       17.5%      1.71

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1 1206-1271   NYKLPYYSSKYTMNIISIFLSLNDSLKGSNKLSSDLFFDLYYTYFNNFLENFLYYQKNYNMEVDRN

   WD40 Template    TGECLRTLSGHTSGVTSV--SFSPDGKRLVSGSED------------------------GTIKVWD