Input parameters:

  Query = EG_PF14_0495 (Len=2189)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PF14_0495, Len=2189):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLKFFIFILHIYLYIDSIYSSELSKHVKHDTDELKYASPTYDPKKGTKVIFYMPGNEQGVIPNNIQNKQHGTSIYPAIEY 80  
WD40-rpts                                                                                      

Query       81 PTTKYPAIEYPGSEMNNGKTGTTNSGIYNKAHGSSNDYNASNSQDKTINLHIDENNSNNSYQPYDSNNTNNNTNSNNNSN 160 
WD40-rpts                                                                                      

Query      161 NNSNNNSNNNSNNYSNNNSNTNSNTNSNTNSNNNTTNYDLNSEYEKIRRKEEEAARRIERERRADINRKNQDNNSNKYNN 240 
WD40-rpts                                                                                      

Query      241 EQNGGYESDGNSPNSRVNINITNNGTHGNPHNNNSYGHKNNMHNTTNGNYANGNYANGNYSKGDYTNGDYTNGDYTNGDY 320 
WD40-rpts                                                                                      

Query      321 TNGINNNMHGKNNYNTANGEYVNGAYDGLNNGSYKLIGNLNNNQNVDNSYNQGNENDKTYTSNYNINLEDNKNSPDNNQN 400 
WD40-rpts                                                                                      

Query      401 YISTFNKDIGPNKSERSYYDVYGREYDDNKYNPYNKTNNHNTNQNGSTTYGSNANGTYGPNGTYGSNGTYEPNESYGPNG 480 
WD40-rpts                                                                                      

Query      481 AYGPNGTYGHNGKYGSKGTYGNNETPYYVEHPEYDNGKSMSDFHVKDSKDNIGPGGDYPNLYQNIYGNEKNPNIFPGSPR 560 
WD40-rpts                                                                                      

Query      561 NINVYSVHHIPNNGANGGLNSGANGGLNNGANDGLNNGANGGLNNGANGGLNNGANGGLNNGMNNGMNNGMNNGMNNGMN 640 
WD40-rpts                                                                                      

Query      641 NGMNNGMNNGTNGGLNNGMNNGMNNGMNNGMNNGIHDDLYNSENSTFNNGLNNSGRTGLNNAYPHNGMLNNGTEYNVHYG 720 
WD40-rpts                                                                                      

Query      721 NSDSNNTNDSMLNENYYSDSDYDDHTPGNKKKVYKSVAERNKKSASQDSLGAGFSDSDSDSEYEVVDGENKKYKKKNKEN 800 
WD40-rpts                                                                                      

Query      801 NEKDKYENNWDSNNYNSDNEIKDGYLSESEREYARNKANEIEDKMKKGEYSRKYKNSKSNESGYASKQTSDSDDSDIEAN 880 
WD40-rpts                                                                                      

Query      881 AFYVDNGQEMLIKEKEHYSSDSEHHKEESASIGNLNVFFPAENYHFSTYMGFDRRSFLPSNEIELEKMIGANFSNEVKNY 960 
WD40-rpts                                                                                      

Query      961 CSRQNVAQKIGDYLNISFEYSRALEELRSEMILDFNKRKHLTNNTDDTILHMIENAEKRKNDPNYKEAYENKDYANNANI 1040
WD40-rpts                                                                                      

Query     1041 FMNEYSNPLSTKYNKILKEYLCHLFVNNPGTKPLERLYYNSLALGELVEPIRNKFKSLASSTIDFNYEIHMASASNIYLL 1120
WD40-rpts                                                                 (____________________

Query     1121 AHFLVLSLAYLSYNEYFTTGTKSFYSLPTILTANSDNSFFMLNEMCNIHYNPNKNFKKDITFIPIESRPKRTTTFYGERR 1200
WD40-rpts      _____________WD 1________________________________)                              

Query     1201 LTCDLLELVLNAIMLININEINNVFSNNNVDGYENSLSFSHNAIRIFSKVCPKINNDNVLKCEFEESSLYNPKIIKNDTS 1280
WD40-rpts                                                                                      

Query     1281 EKSSQKNLKKAFDLLRTYAEIEGHSAEGSTSPYYVSLILDDMKYNDFYKYTLWYEPRELIYGDIRGMQMKKKKKTKYIYN 1360
WD40-rpts                                                                                      

Query     1361 DFMKKSTQLKKKLIKNDLKYNLKSKGLVFLYAMIDKYGSILNKSQKAKVQFLNSTSSIRYYLYLNKVIFKSAKTYLDIMK 1440
WD40-rpts                                                                                      

Query     1441 RVLEELQTSTNTPLKFLVRGNYIENINNIARNDNMFYANLFVLTALSRRDPVKDYYNDKRKMLSATLAEKFANSTSMLIP 1520
WD40-rpts                                                                                      

Query     1521 HKLRKLVVSMKKGLLKKKLLTSLAKVKLLQHIPAHMLENITSSIRFTTHTIATMQIIQNAKYMSKHNFSQYDSKGMLARQ 1600
WD40-rpts                                                                                      

Query     1601 IFTKGGFAEYADNLMAKWFSKGFEEYKREQIENFKMENSIDSELKDSEREDENDSSEESAKKKLQDLQLEEREKMKKENS 1680
WD40-rpts                                                                                      

Query     1681 LLFNQSDKWDQFINKELVRALGLWLEFNDNPTNASSFVYKVVEDSKHLLENNIDNNIIFSRTVKPTKQTAFRRFFNKILS 1760
WD40-rpts                                                                                      

Query     1761 LGNMLLRKPSFRVEHALWFGATIDIKKAFILLEKVSELHKMLNNQDESWLINEAFIEIVDHVVDLSTYKHVREPFGVARN 1840
WD40-rpts                                                                                      

Query     1841 PGMMAINPKYAELSHENRLRELQNSMCADHCSSVWKVISSFALHHLKNPDSLHTYESKFSKNSFGNKIDDKDFVHNFKMI 1920
WD40-rpts                                                                                      

Query     1921 LGGDAVLHYFDNLLPKTMKKDLKAMKYGVSLTSAYSLKLTKIIFSQMQLPYLSQMFYMQAPYFGHFIGKWQKKRQQSRLK 2000
WD40-rpts                                                                                      

Query     2001 EIMSFMTLGSLSAYTLFSAMDITQQAKDIGAGPVASCFTTRMSPPQQICLNSVVNTALSTSTQSAMKCVFSVGLFASIGP 2080
WD40-rpts                                                                                      

Query     2081 YLFAPMAGLAVWNILKSEFKVLQRIDMALKNVFKNMWNKFLSLKGISKLRGIFKRKKAMKKKIIENATRKMNDMKNNPEK 2160
WD40-rpts                                                                                      

Query     2161 AKAHKMALKKINNYSKGSYHYISYAKIRI 2189
WD40-rpts                                   

1 WD40-repeats found in QUERY=EG_PF14_0495 (Len=2189):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6  1100-1170     2.92  235.38  0.04110       12.5%     10.47

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1 1100-1170   SSTIDFNYEIHMASASNIYLLAHFLVLSLAYLSYNEYFTTGTKSFYSLPTILTANSDNSFFMLNEMCNIHY

   WD40 Template    TGECLRTLSGHTSGV-------------------------TSVSFSPDGKRLVSGSEDGT------IKVWD