Input parameters:

  Query = EG_PF14_0492 (Len=177)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PF14_0492, Len=177):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGNTQAILSEKDQKDLLQAANFSETDIKKMYKRFIELDTNKNGQLDPNELFDVPEICDNPLVKRVISIFDSNSDGKVSFV 80  
WD40-rpts      (_______________________________________________________________________WD 1____

Query       81 EFLVGITKLASSTDDFQKKKFAFDVYDINKDGMISNGELFTVMKMMVGNNLNDTQLQQLVDRTILQADKDGDGMISFEEF 160 
WD40-rpts      ___________________________________________________________________)            

Query      161 KDMISHMDVGNKLKLEL 177 
WD40-rpts                       

1 WD40-repeats found in QUERY=EG_PF14_0492 (Len=177):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-148      3.28  250.06  0.02625       30.0%     -15.54

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-148    MGNTQAILSEKDQKDLLQAANFSETDIKKMYKRFIELDTNKNGQLDPNELFDVPEICDNPLVKRVISIFDSNSDGKVSFVEFLVGITKLASSTDDFQKKKFAFDVYDINKDGMISNGELFTVMKMMVGNNLNDTQLQQLVDRTILQAD

   WD40 Template    TGECLRTLS-----------GHT------------------SGVTS---------VSFS-------------PDGKRL-----------VSGSE----------------DGTIK---------------VW---------------D