Input parameters:

  Query = EG_PF14_0258 (Len=414)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PF14_0258, Len=414):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MESLNIPKNVSMDLLEPFITICVIFICLYMIISIESPVYYLIRSFLFKSKIFLHEIKDIFTKINYFALIFSSFFFVSYYI 80  
WD40-rpts                                                                                      

Query       81 LNILNYKNVKSLFCVNFDYYDTILNYNLKYINIQSIFQTAISENYLVNFLYSFKFLFHIFFLNNSNLIKTICTSSLVYLM 160 
WD40-rpts          (_____________________________________________________________________WD 1__

Query      161 LSLYAKRVNRIMFISSIFSIIILSGFVIVYFFKKFLNIKYNHCGHEIFSFVFLLFFYIKNPYLSVYQYNDRSLHPYHGTE 240 
WD40-rpts      __________________________________________________________________)             

Query      241 IRIYIHILFFIFYIINNEKFYEIKLLVAIIIYFIIFLRNTIDSFKMYTFLKVIWLVAYYVTNNYLPFTFSQHFNISTIFN 320 
WD40-rpts                                                                                      

Query      321 SNIMGILSKEIKNNISLYHFNTISKIPFNYLISKTSFFWIPYMLLNKDNKNFKYVIMLLMVVNIIATCTYLPHNIYPGIP 400 
WD40-rpts                                                                                      

Query      401 LNLLLLYYLNKIKI 414 
WD40-rpts                    

1 WD40-repeats found in QUERY=EG_PF14_0258 (Len=414):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    85-227      2.96  237.06  0.03904       12.5%     23.29

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   85-227    NYKNVKSLFCVNFDYYDTILNYNLKYINIQSIFQTAISENYLVNFLYSFKFLFHIFFLNNSNLIKTICTSSLVYLMLSLYAKRVNRIMFISSIFSIIILSGFVIVYFFKKFLNIKYNHCGHEIFSFVFLLFFYIKNPYLSVYQ

   WD40 Template    TGECLRTLSGHTS------------GVT---------S----------------VSFSPDGK----------------------R---------------------------LVSGSEDG-----------------TIKVWD