Input parameters:

  Query = EG_PF14_0250 (Len=1320)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PF14_0250, Len=1320):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLPCVIISFLYLFYLTYIFKVVIIYCDSSFNRKNIKGHTFDSSSEYIHILRGSQPFFSKKILNKKILKTPGDKRGNYEKK 80  
WD40-rpts                                                                                      

Query       81 HNAAQETKNDHLKKERKVVQTIKGKQDGQAINEKRDGQAINERQDGQIINEKKDGQIINEKKDGQIINEKKDGQIINEKK 160 
WD40-rpts                                                                                      

Query      161 DGQIINEKKDGQTTNENNDSISIMYESKNNIEENSKESISLTPYGQESVVKKNELIKEEENNEEKTGAIYVDILNNNNNN 240 
WD40-rpts                                                                                      

Query      241 NEYEHNSVIINNEQQHENVVDTEKYNNYNSDNNNDNINDNHNNDNINDNHNNDNINDNYNNDNHDNNNNNNNNNNNNDNM 320 
WD40-rpts                                                                                      

Query      321 NDNHNNNNDDNNNDDNNNDNNNNINNNINNNNNNINNNINNNNNNNNNNNDNNNNDNNNNNNNNNNNNNNNNNNNNNNNN 400 
WD40-rpts                                                                                      

Query      401 NNNNNNDNNNNNNDNNNNNNNDNNNNNNDNNNNNNDNNNNNNDNVDNNNNNNNNNNNVDNNQENKEEIINKKETYAQKDE 480 
WD40-rpts                                                                                      

Query      481 KIDELNNDKTEEEKHIPTESVNNIKKESDINEQIDDTSNNDNNSDNKKDTDEGKQKENDTNVQEECVQENVINYDKEREQ 560 
WD40-rpts                                                                                      

Query      561 KYEIAINNLIKYHKELTDDDDDDDEEEEEEEEEENENNEINGVYRKIDESNENEKERDSYSKRNYPNIYVKYKDDLEFYN 640 
WD40-rpts                                                                                      

Query      641 AKLKENDLDEFYDYIIGRRNLINITYKNEYALKLKYHKGYTTSLYNLYVVNELKLSDNMYSNFTSPLEEDDNPTLQEASY 720 
WD40-rpts                                                                                      

Query      721 YADLSKIDIDPTVFKEYFLKVNQCDGDYLPLKNTLVEKICHLSHHLRKHPYVNKIKITNQKSMLYRIFLKVMKSFKNLSV 800 
WD40-rpts                                                (_____________________________________

Query      801 QQCIRNVDESNLLDILFLFNEEIVKESKKELNLGKCVNNMIARNKDWYNLINLITLALLGCVTYYKEHYYLNKEEVEEMK 880 
WD40-rpts      _____________________________WD 1_______________________________________________

Query      881 ATKKVVDLPIFDFFNEKVMDIFVPVDLETKIDIDLVEDVTKPTERRRKIFQTWYMAYLFIHKIYLISKMWNIVKNWEAAD 960 
WD40-rpts      ___________________)                                                            

Query      961 FVSNPWYVEHIGSALIPHIMNLHKIEDDEYTFFRYIDQVQFFMSLKRSKNFPISNYDKKNYHIVEQIITFQGTSSPSIWL 1040
WD40-rpts                                                                                      

Query     1041 TNLIYELTPYPFLSKGRLHKGYLFMFEQTVKPYLDGLKKVLLNELKNKSKYTSETPYAIIFTGHSFGAALAQISSFYFSK 1120
WD40-rpts                                                                                      

Query     1121 IMDLKNRTNLKLYSITFGLPTYQDSTFYEDFRNSGVIINNININHDPVRVIMAVPGINDFVNHDEERKLMINFEVEQLKK 1200
WD40-rpts                                                                                      

Query     1201 LNYDFGKSVFNAVEFFNVKNHQRSMLYVFAKYIFNKNVFLELGELHILQTHYYFYYVFLTLLSGWVNEADWGTYFMVPFF 1280
WD40-rpts                                                                                      

Query     1281 LFENIDFSHNELMNKCKEFHKKYNGEMVKKLPNNENCDDN 1320
WD40-rpts                                              

1 WD40-repeats found in QUERY=EG_PF14_0250 (Len=1320):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   763-900      3.00  238.48  0.03739       17.5%      3.05

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  763-900    SHHLRKHPYVNKIKITNQKSMLYRIFLKVMKSFKNLSVQQCIRNVDESNLLDILFLFNEEIVKESKKELNLGKCVNNMIARNKDWYNLINLITLALLGCVTYYKEHYYLNKEEVEEMKATKKVVDLPIFDFFNEKVMD

   WD40 Template    TGECLRTLSGHTSGVTSVS----------------FS--------PDGKRL-----------------VS---------------------------------------G------------SEDGT------IKVWD