Input parameters:

  Query = EG_PF14_0183b (Len=876)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (EG_PF14_0183b, Len=876):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MINNKGNVGKGKRIFNKNYGSISKKKKKRNDKLKKDVSNNKDERLELQKRIDETLGLIVEENKRKQYEEKINNDLEKNEN 80  
WD40-rpts                                                                                      

Query       81 VKNFLKSDKTNNNTYDEDELKNNKNKKYKNNLTIIDKNVLTSAEFKTLPISKRTLRALNENNFIYMTNIQYVSLPIVLLN 160 
WD40-rpts                                                                                    (_

Query      161 KHIYAQAQTGTGKTLCFCIPLIEKMYRNSIDNYNKILGGIIITPTRELVFQIFEVLNMLNKYHKLNICCAIGGKNEEKEK 240 
WD40-rpts      ___________________________________________WD 1_________________________________

Query      241 SIFSYANIIVCTTGRLLYHLENNYYCNLDYLSTLIIDEIDKLIDKSFYDNLKNILLYKPKENCQICLFSATICKFLNVIL 320 
WD40-rpts      ___________)                                                                    

Query      321 NTFHIKDYEYVSINDNDKYIESNNVKQIYIECDIYEKINYLYTFLFSKKNKKIIVFFSTCKQVRFMYEVFKKIKVGVMKF 400 
WD40-rpts                                                                                      

Query      401 LQLHGKLKQTSRLNTYHFFSKKKNFVCLFTTDIACRGLDFSSIDWVIHFDFPDNIETFIHRSGRTGRFTNMGNSLIFLTK 480 
WD40-rpts                                                                                      

Query      481 QIDNKKLFLNVLKDNNIFIKEKFIKKQKLFDIKNKIHSLNAAFVDIKHLAKKALIIYLRHLYIVMKFKDIKKKIQLNELA 560 
WD40-rpts                                                                                      

Query      561 YSYGLIEFSQDMINELNINDEKEVQVKKKKSRLEKFLEILKNKKALKNKQNHEKKEEEKYNNTQDEKEYDNDNEQGHEIY 640 
WD40-rpts                                                                                      

Query      641 DEAHENYMCEIKKKKRVKDISHIDQSQSNENPFIHSDIQSDQDDLFIQKRVEIKDDTPIMLPTKKRKKRVKVAKTLSNSI 720 
WD40-rpts                                                                                      

Query      721 LYDDSGNEIKDDNVKFKILVNELNQNEDHDMEQDTHYDDDDDNNNNNDKYDQKTYIESLKEKIQRDNEKMKISKLRKKKD 800 
WD40-rpts                                                                                      

Query      801 FIADRKKHEEDSSSTDNTNFSDIQDKDDLEYNESSEGDNGNYNESDDFVKNKKKISEKCDPTDDISDLENKVMMFL 876 
WD40-rpts                                                                                  

1 WD40-repeats found in QUERY=EG_PF14_0183b (Len=876):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1   159-252      2.99  238.00  0.03794       12.5%     41.00

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  159-252    LNKHIYAQAQTGTGKTLCFCIPLIEKMYRNSIDNYNKILGGIIITPTRELVFQIFEVLNMLNKYHKLNICCAIGGKNEEKEKSIFSYANIIVCT

   WD40 Template    TGECLRTLSGHTSG------------------------VTSVSFSPD--------------------GKRLVSGSED----------GTIKVWD